Gene Athe_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1001 
Symbol 
ID7407902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1099075 
End bp1099479 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content34% 
IMG OID643715366 
ProductNusB antitermination factor 
Protein accessionYP_002572875 
Protein GI222528993 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000103946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT TGTATGCTTA CAGATTTGAA AATAATACAC AAGACATAAT AGAATTTTAC 
AAAAAGTTTA GAGAATTAAA TCAAGATGAA GATTTCAAGG ACATAGATGA GAAGTATCTT
GAAAGATTAT TAAAAGGAGT AATTCAAAAC CAGCAAAAAA TAGATAACAT TATTGAAAAG
TACTCAAAAG ATTGGCCACT TAGCAGACTT CCAATGGTTG AGCTTGAACT TATGAGAATT
GCTGTGTATG AGCTTTTATT TGAAGAGGAA GTGCCTGTTT CTGTTGCAAT TGACGAGGCT
GTTGACATGG CAAGTATATT TGGGATAGAA AAGGCGCCAA GCTTTGTGAA CGGTATACTT
GGCAGGATTG CTGCAAATGA GGTGAAAAGA GGCCAGAAAT CATGA
 
Protein sequence
MKILYAYRFE NNTQDIIEFY KKFRELNQDE DFKDIDEKYL ERLLKGVIQN QQKIDNIIEK 
YSKDWPLSRL PMVELELMRI AVYELLFEEE VPVSVAIDEA VDMASIFGIE KAPSFVNGIL
GRIAANEVKR GQKS