Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0143 |
Symbol | |
ID | 7408505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 180621 |
End bp | 182699 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643714547 |
Product | alpha amylase catalytic sub domain protein |
Protein accession | YP_002572070 |
Protein GI | 222528188 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0052779 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTT TAAAAAAGCT TGTTGAGATT CTGAATAATA AAGCAAAAGA GTGGGATGGA AAAAACGATT TCAGAGTACC AAAACTTTGG GATAGTTTCG GCTATGATGG GTTTGAGAAA AAAGAAAACA ATGATGGCAC AATCTCAGTA AACCCTTATA AGTTTGTTGC ACAGGCGATA GAAAAAGCAA TTTTGCCTTG TATGAAAAAT AATACTGATT ATCTTCAACC ACTTTCAGAA ATACTTTCTA AAGATAATAG ACCTTCAGAA AAAAGTTATA GCAGCTGGAT TGAAAAGAGC AGTGTATATG GTATGCAAAT TCGTACATTT TCAGCCTGGG ATCATGATGG TTCAAAAGAA CTTGAACTTG AAAATAGCTT CGGTCTAAAA GATACAGGTA CATTTGTTAA AACAATTGCA CTTTTACCAT ACATAAAAAG AATGGGCTTT GATGCTATTT ATACACTTCC AATTACCAAA AACAGCACAA AGTATAAAAA AGGTGAGATG GGTTCACCTT ATGCAGTCAA GAACTTTTTT GAACTTGACC CAGTGCTTTT TGACCCTATG GCTGATGAAC TTTCAATAGA TGAACAATTT AAAGCTTTGA TTGAAGCGTG CCATATTCTT GACATAAGAT TTATAATTGA TATTATTCCA CGCACATCTG CGAGAGATTC TGATTTCATA CTGGAACATC CTGATTGGTT TTACTGGATT AAAGTAGAGG ATTTGAAAGA CTACGGTCCG CCAAAGCTGA CTTTGATAAA AGAGTTTACA AAGGCAAATG AAGAAAACAT TGAGCTTATA TACAAAGACC CGGCTGTGCA AAAGCATATT AAAAAGTTTG TACCATCACC TGACAGGTTT GACCCTCAAA AGTGGCAGAG TATAAAAGAA AGGTGCGAAA AAGACAAAAA CCTTGACTTT TTCGAGCTAA TTGAAAAAGA GATTGGGATA ACTACTGCAC CAGCTTTTTC AGATTGTCTT AATGACCCGC AGCCACCTTG GACAGATGTG ACATATTTGA GGCTTTATCT TGACCATCCT GTACAGTCTG CAAAGTATGT AGATGAAAGC CAGCCGCCGT ATATTCTTTT TGATGTTATA AGAGGAAATA TCTTCAAAGG TAAAAAGCCA AACAAAAAAC TTTGGGAAAA AATCGCAAAC ATCATTGTAT ACTACCAGAA GAACTTTGGC ATAGATGGTG CAAGGATTGA CATGGGTCAT GCTCTTCCAA AAGAACTGGA AGACATGATA ATTTCAAATG CCAGAAAAGT AGACACCGAA TTTTGCTTTA TAGCAGAAGA GCTTTCGATG AATGCGCACA GAAAAGCAAA AGAGTCAGGG TATGACATGA TAATAGGTGA TCTTTGGGCA AGAGAACCAC GATACTATCA AGGAACGCTG AAAAAGGTTT TGGATATACT TTTGCAGCTT GAAGTCCCTG TTTTTGCGGC ATGTGAAATC CCAGACAGTC CGCGCGCAGC TTCAAGGCTT GGAAAAAGAG AATTTTCACG GTTTGCGACA GTGCTCAATT TCTTTTTACC AAACAGTGTG CCTTTTGTCA CGTGCGGGCA GGAAGTTTAT GAAGTTCAGC CAATGAACTT AGGTCTTGAC CCGCAACCAG AAGGCAAATT TATGCTTTCT AAATCAGACC CTCTTTATGG GAAACTTGCG TTTTTTGACA AGTACGCTCT TCACTGGACA AACGAAGGTG CAGATGAAAT GATAGCCTTA ATTGAAGGAG TAGCTAAGAT AAGAAAAGAA TATTTGGACT TTATGAGCAA AGAAAACTTT TTCAAGATTC CTCACAACAG CAAATTTGTC TTGGCATTTG GATACAAACT TTTTTCTGAA CATGGGAAGC AGTACCTGAT TGTAGTTGCA AACGCTGATA TTCTGCGAAA AAGAAAAGTC AGTTTGAATT TGATGAAAGC AGGTTTATTT GATGTGGGGA AAGGAAGACA AATTGAGTGT ATCTACTCTC TAAAAGGAAA TAAAAATCAT ATGTACGATT TTCCACACAT TACAGTTGAT ATGGAAACTC TTGATATAAA AATTTTAAAG GTAAAATAA
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Protein sequence | MSALKKLVEI LNNKAKEWDG KNDFRVPKLW DSFGYDGFEK KENNDGTISV NPYKFVAQAI EKAILPCMKN NTDYLQPLSE ILSKDNRPSE KSYSSWIEKS SVYGMQIRTF SAWDHDGSKE LELENSFGLK DTGTFVKTIA LLPYIKRMGF DAIYTLPITK NSTKYKKGEM GSPYAVKNFF ELDPVLFDPM ADELSIDEQF KALIEACHIL DIRFIIDIIP RTSARDSDFI LEHPDWFYWI KVEDLKDYGP PKLTLIKEFT KANEENIELI YKDPAVQKHI KKFVPSPDRF DPQKWQSIKE RCEKDKNLDF FELIEKEIGI TTAPAFSDCL NDPQPPWTDV TYLRLYLDHP VQSAKYVDES QPPYILFDVI RGNIFKGKKP NKKLWEKIAN IIVYYQKNFG IDGARIDMGH ALPKELEDMI ISNARKVDTE FCFIAEELSM NAHRKAKESG YDMIIGDLWA REPRYYQGTL KKVLDILLQL EVPVFAACEI PDSPRAASRL GKREFSRFAT VLNFFLPNSV PFVTCGQEVY EVQPMNLGLD PQPEGKFMLS KSDPLYGKLA FFDKYALHWT NEGADEMIAL IEGVAKIRKE YLDFMSKENF FKIPHNSKFV LAFGYKLFSE HGKQYLIVVA NADILRKRKV SLNLMKAGLF DVGKGRQIEC IYSLKGNKNH MYDFPHITVD METLDIKILK VK
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