Gene Apre_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0998 
Symbol 
ID8397785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1069623 
End bp1070453 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content36% 
IMG OID644995346 
Productprotein of unknown function DUF477 
Protein accessionYP_003152747 
Protein GI257066491 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGG CTAAAAGAAT ACAATTAAAT ATAATCATGC TGATTATCTT CTGCCTTTTT 
CCAAATCTTG CTCGAGCAGA TGATATATCC AGCAAGGTAA ATGATTATTA TTATGATGAG
CTTTCAATTT TAGATGAAAG TACCAAGGAA AATATCAAAA AGACCAATAG GGAGCTGGAA
AGTAAGACTG GAGCTCAGAT AGTGGTCCTA AGTCTTAATA ATCCAGACGG TCTAGAAGGT
ATGGATTACG GAAGCGATTT ATTTAATGAA CTAAAACTCG GTGATAAGGT AAAAGATAAT
GGAGTCTTGA TTTTATTTCT AGAGGATAAA AATACAGACC AAAGAGAAAT TGCGATTATA
CCAGGATATG GTCTAGAAGG AATACTTAAT GACGCTAAAG TTGGCAGAAT AATAGACAAC
TTTATGTTAG ATTATTTCAA AAATGGCCAA TACTCCAAGG GAATTGATGA AGGCTTCAAT
GCCGTAGTTA GTCAAGTTTT AAGTGAATAC GACATCACAC TAGATGGTAA TTATGAAGCT
TATCAAGAAA ATCTAGAAGA TGGTGATGGA ATTAGTATGT TTGAGATATT ATTTATATTA
GTAGTATTTA TATTAATATC AAACATGTTT ACTAGAATTA GTCGCGGACC TTCTTCATAT
TATAGAGGAA GAAGAAGGAG AAATTTCCCA GGTTGGTATG GTAGAAGTTT CTGGAATGAT
AACGATGATG ATCCCTTCTC AGGTTGGTCT TCTGGTGGAG GATTTTCCGG AGGAGGCTTT
TCCGGCGGGG GTGGTAGCAC CGGTGGCGGA GGAGCTAGTA GAAAATTCTA A
 
Protein sequence
MEKAKRIQLN IIMLIIFCLF PNLARADDIS SKVNDYYYDE LSILDESTKE NIKKTNRELE 
SKTGAQIVVL SLNNPDGLEG MDYGSDLFNE LKLGDKVKDN GVLILFLEDK NTDQREIAII
PGYGLEGILN DAKVGRIIDN FMLDYFKNGQ YSKGIDEGFN AVVSQVLSEY DITLDGNYEA
YQENLEDGDG ISMFEILFIL VVFILISNMF TRISRGPSSY YRGRRRRNFP GWYGRSFWND
NDDDPFSGWS SGGGFSGGGF SGGGGSTGGG GASRKF