| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0644 |
|---|
| Symbol | |
|---|
| ID | 8397425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 741867 |
|---|
| End bp | 743159 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 644994999 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003152404 |
|---|
| Protein GI | 257066148 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00287376 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAACT ATATATTAAA AAGATTTAAA AAAATTGTCA TTAGGATAAT ATCTTTGATG
TTTTTTCTGG TATTTATATT TATGACATTT CTCTATTTCA ACTACAAATT AAGAGAGGAA
TATCCTAATC CAAATGATGT TTACGCTTTT GTGGAAGAAA ATAAAACTGA TACTTACTTG
AATAGAAAAA ATAAAGAATT TTTGAAAGAA AATAATATTT GGTCAATAAG GCTTGATAAA
AATGGACATG TCATAGAAAG TTTCGATAAA CCGAGAGAGG TCAAGGATAA GTTTGAGCTT
ACTGATGTTG CAAGATTTAC TAGATACTAC TTAGCAGATT ATCCTGTTTT TACCTATATT
ACAGGAGATG GATTAATTCT TTTCGCCTAT CCCAAAAATT CTTTGGATAA ACTCCCAGCT
AATTATTATA ATTATAAGAA TTTGATCTTT AATTTAGAAA TACTTTTAGT ATTTGTAATC
CTATTCCTAT TGTTTGTATA TATATTTTAT AGGATAGACA TTAAAAACAT CTTAAAAAAT
ATCTCTCCTC TCCAGCAAGC GATGGATGAT ATATATGAAG AGGACTACGA AAAGCTGGAT
GAGGATGGAG AACTCAAAGA TTTGGCGGTT TCAATAAATC AAGCAAATGA GAAATTCATT
AATCTAAAGA AATCCCAAGC TAAGTGGATA CGAGGTCTAA GTCATGATGT TAGGACTCCG
CTGGCTAAAA TTTCACGGGA AATAAGTAAG GAAAACAAGG CTGATTTAGA TATCGAAAAT
ATCCAAGACC AAGTAGTTAA AATTTCAAAT ATACTTGAAG GATTAAATCT TACCATGTCT
TTAACTAATA TGGACAAGGA GAGTTTTAGT GAACAAAGCC CCCTAAAAGA GATTCGTAAA
GTTATTATAG ACAAATTAAA TGATAACCCA GATAGAGAGA TTATTTTTGA AAACAAACTG
GAAAATAGAG ATTTAAAAAT CAAAATGGAC CCCAATTTAT TTTATAGGAT GTTAGAAAAT
ATTATAAAAA ATTCCCTCCA ATATACAAAA GGCAAAATTC TTCTTACAAT TTCAAATTCA
GTAAACAAAT TAAATATTGA AATTATAGAT GAGGGCGATG GTATATCTGA TGAAATAATA
GAAAAAATAA ATAAGGAAGA TTTGACGAAT GTTACTAAAC ATGGTCTAGG GATTCTTATA
TCCAAACAAA TAGCTGAGCT ACATGGAGGA AATTTTGATT TAAAAAATGA AAATACTGGA
CTTAGAGTAA TATTTACATT TGAATATATG TGA
|
|---|
| Protein sequence | MFNYILKRFK KIVIRIISLM FFLVFIFMTF LYFNYKLREE YPNPNDVYAF VEENKTDTYL
NRKNKEFLKE NNIWSIRLDK NGHVIESFDK PREVKDKFEL TDVARFTRYY LADYPVFTYI
TGDGLILFAY PKNSLDKLPA NYYNYKNLIF NLEILLVFVI LFLLFVYIFY RIDIKNILKN
ISPLQQAMDD IYEEDYEKLD EDGELKDLAV SINQANEKFI NLKKSQAKWI RGLSHDVRTP
LAKISREISK ENKADLDIEN IQDQVVKISN ILEGLNLTMS LTNMDKESFS EQSPLKEIRK
VIIDKLNDNP DREIIFENKL ENRDLKIKMD PNLFYRMLEN IIKNSLQYTK GKILLTISNS
VNKLNIEIID EGDGISDEII EKINKEDLTN VTKHGLGILI SKQIAELHGG NFDLKNENTG
LRVIFTFEYM
|
|---|
| |