Gene Apre_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0260 
Symbol 
ID8397034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp293047 
End bp293850 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content31% 
IMG OID644994621 
ProductMethyltransferase type 11 
Protein accessionYP_003152033 
Protein GI257065777 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00488037 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGA GCGAGATTTT AAAAATTGAT AACGACTTAG ATAGGAACGA AGAATTATAT 
AAGGTATTTG ATGAAGATAA ACGCCTTAAA TCAAGAACTG GTCTTGTAGA AAAAATAACT
ACTTTAACAG AAATAGAAAA ACTAATTAGT TCAGACTCAA AAATCCTTGA TGTTGGTGCT
GGAACTGGAG CCTACACCCT TCCATTAGGT CAAAAAGCTT GTGAGATAGT AGCCCTTGAG
CCATCATCTT CAAATTTCAA ACTTTTAGAG TCTAAGTCAA AAGCCCTTGC CAACATAAAA
GTCTATAATA AGTCCTCTTA TGACTTAAAA GATCTAGAAT CAGATTATTT TGATATAGTG
CTTTTATTTG GGCCAATGTA TCACCTATCA AGGAAAGAAG ACAGAATGGA TGTCCTTAGA
CAGGCAAAAA GAGTGTGCAA AGATGATGGT TATATATTAA TATCTTTTAT AAATCACGAC
ACAGTCTTAA TAAGCGAAAC TATTAACTAC AACACAAATA TTTTTTCAAG TGATTCATAT
ATTAGTGAGA AACAAAGATT AATTGATAGG CCTTTTGTAT TTTTCAAATT AAAGGAAGCA
AAAGAAATGA TTGAAAAATC AGGCTTAACT ATAAAAGAAA TAGTTTCAAG CGATGGATTT
TCTGAGATTT TAAGTCAAAA ATTGGAAGAA ATGACGGAAA AATCATTTAA TAATTATCTA
GCCTTCCACC TTAATAATTG CAAAAATCCA GAAACACTAG GAGCTAGCAA CCACTTACTT
TTTGTGTGTG AGAACAAAAA ATGA
 
Protein sequence
MDMSEILKID NDLDRNEELY KVFDEDKRLK SRTGLVEKIT TLTEIEKLIS SDSKILDVGA 
GTGAYTLPLG QKACEIVALE PSSSNFKLLE SKSKALANIK VYNKSSYDLK DLESDYFDIV
LLFGPMYHLS RKEDRMDVLR QAKRVCKDDG YILISFINHD TVLISETINY NTNIFSSDSY
ISEKQRLIDR PFVFFKLKEA KEMIEKSGLT IKEIVSSDGF SEILSQKLEE MTEKSFNNYL
AFHLNNCKNP ETLGASNHLL FVCENKK