4 homologs were found in PanDaTox collection
for query gene Apar_R0047 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013203  Apar_R0047  SRP RNA; RNA component of signal recognition particle  100 
 
 		 94 bp  186  6e-46  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.168836 
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  91.89 
 
 		 106 bp  50.1  0.0001  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
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NC_013170  Ccur_01560  bacterial signal recognition particle RNA  89.47 
 
 		 97 bp  44.1  0.006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.916519  hitchhiker  0.00823643 
 
 
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NC_013204  Elen_R0015  SRP RNA; RNA component of signal recognition particle  89.47 
 
 		 109 bp  44.1  0.006  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.712093 
 
 
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