| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0991 |
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| Symbol | |
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| ID | 8413863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1117448 |
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| End bp | 1121233 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022580 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_003180011 |
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| Protein GI | 257784794 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.620303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA AGGCGCTTAA TAGCCTTTTC TCCATACTTT TAGTGCTTGC ACTCTTACCA
GCGCCTGCAT TTGCAGAAGC AGCGGGGGAG TTGACTACTG CAGCAACTTC TTCATCAGAG
ACTGTCCTTA CTGCTAATGA CAACGCTTCT AGTGAGACAG CTGACACATC TGGAACAACT
ACAACCTCTA AAGAGACGGG TTCTGGTGCT GCAGCAACTA CTGATGAGAC TGCCTATCCA
CATAAAACAC TAGATCAGGC TGTAGAAGCA CTGACCAATT CTTTCTATAA GCCTAAACCT
CGTTATGGCG TAGATACTAA CCTCAACACC ATGGTTGCAG AAGAGTTGCG TCGTATTGGT
GCTGGAGAAG TTAACGTTAG AGTGGCATCT GTTCAGATGT CTTCGACAGC TTCGTATGCT
CACGCTGGTG TTTCTACTGA CTTCGCAACT AATGGTTCTA TTGAGTACTT CTGGATGGAT
GCCGCTGGCT TAACTAACCA GAAAAGTACT CTTATTTTGC GTCAGGCTAA AGTAACCTTT
GAACTTTCCA AGGATGGAAA GACTGCTCAG TATACCTGCA ACGTTTTAAT TCCTTGGGAT
GAGGCAAAAT CTCAGGTGCA GCTGAGTGAT GTATCTCAAA ATCTTGCTCC ATCATTTGCG
ACAGGACAAA ATGAATCTTC CGTAACTTCA AACTTTACCC TTCCACATAA GCTTATTTCT
GTTGATGGAC ATTTGCTTTC ATGGTCTAAG GTAACTTGGA CCAGTTCTGA CACGTCTACC
GTTCGTGTTG ATGGTTATGG TACTGAACCT TATAAGGCAA CGGTTATACG TGGTATTCGT
GATAAACAGG TAACGCTGAC TGCAAACGTT TCTTTGAGCG GCTCCGATGC CCCTCAGACA
AGCTATCAGC GATCCTTTAC CATAACGGTT CCAGGTGATC CTTCGGCTAT TAGTGATGCT
CAGAATAATC TGTTGAGGCG TATCAACAGG CGTTTCTCGG TAGCAGCCAT TAAAGATGTG
TATACCAATC ACTCAATTAA TGCTCAGGCT GTCACAGACG ATCTTCAGAT GCCTACACCA
AAGAATTTTG GTTTGGACGG AAAGCGCTAT CAATTTACTT ACACTTCCTC TAATGCTGCA
GTTACGTTTA ATGGTTACCG AGCGACGGTA TATCAGCCTC TTCCTTCTGC CTCTGCACAG
CAGGTAGATA TCACCCTAAC TGTTACTGAT AAGGAGAATC CCGAGGTAAC AGCCTCTAAG
ACTCTTACGC TTACGGTAAG CCCCCTCAAT CAATCTGACA TTGACGCAGA GCTTTCTTTG
ATGAAGGAGT CAAAGGCTCA TTTCTGGGAT GCTCTTGCTA CTCCTTCTGG CCAGCAGAAC
AAACAAGACA GCATTTCTGA GTCCCTGGCT ACACCAAATA AGTTCTATCG TGCAACAGAC
GGTTCTTTGA CCTGGTCTTA TGACGTTAAT AATACCGATA AGACCGCAAG CGGTATTGTA
CCTTCTGAGT TTTCTACATA TGATCCAATG GGCCCTGCTA ATCAGGCACG CACATATAGT
TCTTCTCAAC CAAAAATCAT TCAGAACGAG AATCTTGTTC TGGCGCAGAC TCCTGAGTAC
AACACGTCTG TTACAGTTTC GGCACTTCTT TCAAGTGCAC GTTATTCTCG CTATGCAAGC
CTGTATCCAG ATAATGAGCA GTTCCAGGCT CTTGCTAATC AGAAGGTCTC TGCCACTTTT
ACTGTGAAGG GCGAGAAGGG CGCTCGATCT GCAGAGCAAA ACTTAGATTC AAGTCAGCTT
GTTTCCGTTA CCCTTTCCGT AGTGGGTCTT GATAAAGATG GTAAGCCTCA GCATTGGGCT
CCTACGCAGA CCATTGAGGT TCGCAAGGGT TCAACTGCTG ATAAGGTAAC GTATGATTAC
CTGAAGAATA ATGGCTTAAC ATACAGTGCG GATAGTGGTT TTCTATCTTC TATTACGTCT
CCTGCGCAGG GTCTTACGCT TGCAACAACA CAGGTAAATG GCGCCTTCAA GTGGTGGCAG
CTCTTTGTGA ACGGCCAGCT TTCGGACAAG ATGGCAAACA ACGTTACCTT AGACAAAAAC
ACTACTATTA CCTGGACATA TGGTGGTCAG AATAGCTCCA TTCCAACTCC TCAAAATGAG
CTGGTTATTA ATCCATTTGC TGAGCACCCT AATTACGAGG CATCATGGAG CGGTTTTGGC
AGCGGAAACA GCTCTACTAC CACCCAGAAC ACTCCAATTA ATTCTGCGGC TTTGCGCTGG
AGTGTGACTG AGGGCACTCA GAATGTACCT GGATTCATTT CTGACCAGGT AATTGTTAAA
GATACCATCT ATTACGTGAG TGGTTCTACT CTCAAAGCAG TTGACGCCGC AACGGGAAGT
CTTATTGCTG AGGCGCAGAT TGGTTCTACA GTTTCGTACT TTGCACGACC TCTATACGTT
AATGGCATGA TTGTTGTTGC TACTGATGAT GGATGTCTTA CTGCTTTCTC GGCAACAACT
ATGGAGTGCA TCTGGAAGAC AGAACCACTT GATACTGCCA ATACACTACA GTCTGTTTCT
AGTTTGACTG TTAATAACGG CACCATTTTG GCTGAGTTTA CCAAGATGAG TGGCTTTGAT
GCTGCCGGTG GTTACATGAT TGCTGTTGAT GCTGCTACTG GTGCGCTTCG TTGGAAGCAG
GAGGCACAAC CTGCAAATAC TCCTGGAACA ACCCCTGGTC AGCCTTCAGG GTATTACTGG
TCTGGCGCAG CTGCTTCTGG CTCTGACTTT GTGATTGGAG ATGAGTCTTC CTCAGCTAGA
CTCATCAATG GCACAACTGG CGCCATTGAG GCTGAGCTTA ATCTTGGCTC ACCAATTCGT
GCAGGTATTG TCCCTGTTTC TGTTGATCAA AATGGTAATG GAACCTATCT TGCTGTAACC
AGAAATGATG GTACATTGCA TCTTATTAGG AGAAACGGTT CTTCTCTTGT TGAAGAGAAG
CGGGTTAAAT TTGCAGCAGA GTCTACTTCC ACACCAACAA TCAGCGGTTC TAATGTCTTT
GTTAACGGTG TTGATGCCGA GGGTTACGGA ACTATCTCCG TAATTTCTCT TGACACGTTT
ACCGTGACTG ACCAGGCACG TGCTGGCAAA GGTAAGTCTC AGAGCACGCC TCTTGTTTCT
GTTCAGCAAA GCGGCACCTA TGCATATTTC ACTGTAAATG GACTGCCTGG TGGCGTGTGG
GTATACAAGT TGGGCACTGG TCGAGCAGCT CAGATTTACA CTCCCGATAA AGATCATCAG
AACTACACTA CGTCGTCAGT TATTGCAGAC TTTGCGGGCA ACCTTTACTA CACCAATGAC
TCTGGTACGC TTTTCTCGCT TATTAATCAG AAACCATCTG GCGAGAATAC CCAGCCATCT
GGTGATATTT CTAACAGGAC AGATATCACA TCCACAGATG CGCCAGCTCA AGACTCTTCA
TCTCCGGCGG CGCATGAAAG TTTCTCAGCT ACTCCCACAA ATGCAGGTGA GGAGGTCACA
CAAGCCCCAT CTGAGAATGA GACTGCAGAT ACCAGCTCTG ACAAGAAGCA ACTTCCACAG
ACTGAATATG TAAACAAGGA AACTGCCGCC CCACGACAGG GATCCTCTGC GCCTACCATT
CCGCTTTTGA GTATCTTTGG TTTTTTTGGT TCTGCAGCAG TCCTTGCAGT ATTTGTAGCG
TTACTTAAGA AAGAAACCGC TGCAATTCAC CATGTTTCCA ATGGCAGAGG CAAGGTGAAC
AAGTGA
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| Protein sequence | MIKKALNSLF SILLVLALLP APAFAEAAGE LTTAATSSSE TVLTANDNAS SETADTSGTT
TTSKETGSGA AATTDETAYP HKTLDQAVEA LTNSFYKPKP RYGVDTNLNT MVAEELRRIG
AGEVNVRVAS VQMSSTASYA HAGVSTDFAT NGSIEYFWMD AAGLTNQKST LILRQAKVTF
ELSKDGKTAQ YTCNVLIPWD EAKSQVQLSD VSQNLAPSFA TGQNESSVTS NFTLPHKLIS
VDGHLLSWSK VTWTSSDTST VRVDGYGTEP YKATVIRGIR DKQVTLTANV SLSGSDAPQT
SYQRSFTITV PGDPSAISDA QNNLLRRINR RFSVAAIKDV YTNHSINAQA VTDDLQMPTP
KNFGLDGKRY QFTYTSSNAA VTFNGYRATV YQPLPSASAQ QVDITLTVTD KENPEVTASK
TLTLTVSPLN QSDIDAELSL MKESKAHFWD ALATPSGQQN KQDSISESLA TPNKFYRATD
GSLTWSYDVN NTDKTASGIV PSEFSTYDPM GPANQARTYS SSQPKIIQNE NLVLAQTPEY
NTSVTVSALL SSARYSRYAS LYPDNEQFQA LANQKVSATF TVKGEKGARS AEQNLDSSQL
VSVTLSVVGL DKDGKPQHWA PTQTIEVRKG STADKVTYDY LKNNGLTYSA DSGFLSSITS
PAQGLTLATT QVNGAFKWWQ LFVNGQLSDK MANNVTLDKN TTITWTYGGQ NSSIPTPQNE
LVINPFAEHP NYEASWSGFG SGNSSTTTQN TPINSAALRW SVTEGTQNVP GFISDQVIVK
DTIYYVSGST LKAVDAATGS LIAEAQIGST VSYFARPLYV NGMIVVATDD GCLTAFSATT
MECIWKTEPL DTANTLQSVS SLTVNNGTIL AEFTKMSGFD AAGGYMIAVD AATGALRWKQ
EAQPANTPGT TPGQPSGYYW SGAAASGSDF VIGDESSSAR LINGTTGAIE AELNLGSPIR
AGIVPVSVDQ NGNGTYLAVT RNDGTLHLIR RNGSSLVEEK RVKFAAESTS TPTISGSNVF
VNGVDAEGYG TISVISLDTF TVTDQARAGK GKSQSTPLVS VQQSGTYAYF TVNGLPGGVW
VYKLGTGRAA QIYTPDKDHQ NYTTSSVIAD FAGNLYYTND SGTLFSLINQ KPSGENTQPS
GDISNRTDIT STDAPAQDSS SPAAHESFSA TPTNAGEEVT QAPSENETAD TSSDKKQLPQ
TEYVNKETAA PRQGSSAPTI PLLSIFGFFG SAAVLAVFVA LLKKETAAIH HVSNGRGKVN
K
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