| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0850 |
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| Symbol | |
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| ID | 8413716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 944634 |
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| End bp | 945539 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022433 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_003179870 |
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| Protein GI | 257784653 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.261607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTTTA TGGACAATCT TCGCCGTGGT CTTGAGCGTT CTCGCGAGAC TATTAGCGAG
ATCTTTTATA TGGGTGGAGA GGTCACCGAA GATTTTTGGG ATGATCTTGA AGACACGCTG
GTTATGGGCG ACATGGGCGC TGAGGTGGCT ATGCGTGTTA CCGATGACCT GCGTGAGCGT
GCCGCGCGAG AAAACCTTAC GCGCTCCGAT CAGCTTCGTA GAGCCCTTGT AGAGCGACTT
ACTGCAGAGT TTCCTGTTGC TAAAAGAGAT CCATTTACAG ATACGCCTTC CATTGTCTTG
TTTGTAGGTA TTAACGGCGC TGGTAAAACT ACTACTGTTG GTAAAATTGC CGGTCGTGCG
CATGCTAGTG GCGTTAAGAC CTTGATTGGT GGCGCTGACA CATTCCGCGC AGCTGCTATT
GAACAGTTGC AGGTATGGGG AGAGCGCTCT GGTATTGAGG TTGTAACCAG AGAACGTGGA
GCAGACCCTG CAAGTGTATG TTTTGAGGTT GTTGAGACCG CAGCAAAACA AGGTACTGAG
CTGGTGTTGA TTGATACTGC TGGCCGTTTG CACACCTCAT CTGATTTGAT GCGTGAGCTT
GCTAAGGTTG TTTCAGTTAC CAGGAAGCGC GCAGGGGATA TTCCGGTGAG CGTTGTTTTG
GTTATTGATG CAACTACCGG TCAGAACGGT CTTAACCAGG CAAAAGAGTT CAATGATGCG
CTGTCTTTGG ATGGTCTTAT TGTCACAAAG CTTGATGGCA CTGCAAAGGG AGGAATTGCC
TTGGCAATTT CCAACCAGCT TAATCTGCCT ATTTATCGTA TTGGTGTGGG CGAGTCTATT
GATGATCTTC AGACATTTGA CGCTCGTTCA TTCTGTGAAG CACTTGTTGG TGAGGGAGTT
CAGTAA
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| Protein sequence | MGFMDNLRRG LERSRETISE IFYMGGEVTE DFWDDLEDTL VMGDMGAEVA MRVTDDLRER
AARENLTRSD QLRRALVERL TAEFPVAKRD PFTDTPSIVL FVGINGAGKT TTVGKIAGRA
HASGVKTLIG GADTFRAAAI EQLQVWGERS GIEVVTRERG ADPASVCFEV VETAAKQGTE
LVLIDTAGRL HTSSDLMREL AKVVSVTRKR AGDIPVSVVL VIDATTGQNG LNQAKEFNDA
LSLDGLIVTK LDGTAKGGIA LAISNQLNLP IYRIGVGESI DDLQTFDARS FCEALVGEGV
Q
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