Gene Apar_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0678 
Symbol 
ID8413539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp757653 
End bp758003 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID645022256 
Productribosomal protein L21 
Protein accessionYP_003179698 
Protein GI257784481 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000153253 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.209425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAA TCGTAGCAAC TGGTGGCAAG CAGTATAAGG TTGCCAAGGG CGACGTAATC 
AGCGTCGAGA AGCTTGATGC GCAGCCTGGC GATAAGGTAA AGCTTGATGT TCTTATGCTT
AACGACGGCA AGAAGGTTGT TGCTGACGCT GCCACTCTTT CCTCTAAGAA GGTTACCTGT
GAGGTTCTTG AGCAGTACAA GGACAAGAAG GTTCTTGTAT TTAAGTTCCA TAAGCGTAAG
CGTTATCACC GCGCCAATGG TCACCGTCAG AACCTTACTA AACTAAAGGT TACCTCGCTC
CCTACCGCTC GTAAGGCTGC TGCTAAGGCA TCCGACGAGT CTGCAGAGTA A
 
Protein sequence
MYAIVATGGK QYKVAKGDVI SVEKLDAQPG DKVKLDVLML NDGKKVVADA ATLSSKKVTC 
EVLEQYKDKK VLVFKFHKRK RYHRANGHRQ NLTKLKVTSL PTARKAAAKA SDESAE