Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0678 |
Symbol | |
ID | 8413539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 757653 |
End bp | 758003 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645022256 |
Product | ribosomal protein L21 |
Protein accession | YP_003179698 |
Protein GI | 257784481 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0261] Ribosomal protein L21 |
TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000153253 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.209425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCAA TCGTAGCAAC TGGTGGCAAG CAGTATAAGG TTGCCAAGGG CGACGTAATC AGCGTCGAGA AGCTTGATGC GCAGCCTGGC GATAAGGTAA AGCTTGATGT TCTTATGCTT AACGACGGCA AGAAGGTTGT TGCTGACGCT GCCACTCTTT CCTCTAAGAA GGTTACCTGT GAGGTTCTTG AGCAGTACAA GGACAAGAAG GTTCTTGTAT TTAAGTTCCA TAAGCGTAAG CGTTATCACC GCGCCAATGG TCACCGTCAG AACCTTACTA AACTAAAGGT TACCTCGCTC CCTACCGCTC GTAAGGCTGC TGCTAAGGCA TCCGACGAGT CTGCAGAGTA A
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Protein sequence | MYAIVATGGK QYKVAKGDVI SVEKLDAQPG DKVKLDVLML NDGKKVVADA ATLSSKKVTC EVLEQYKDKK VLVFKFHKRK RYHRANGHRQ NLTKLKVTSL PTARKAAAKA SDESAE
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