| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0500 |
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| Symbol | |
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| ID | 8413349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 573405 |
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| End bp | 574130 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022068 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003179522 |
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| Protein GI | 257784305 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA AAAACACAGA TGTTGTAGCC GATGTAATGA CCTATCTTGC TCACGCGCAT
AACCACACAC AGGAAGTTGT GGGCACAGTA GCTGCATCAG TATCACACAT AAGAGCTGAA
GCTCGCACTA AAAAGAGTGC TACTACACGT AAGCGTATTA TGCATGAAAC TACAGAACTT
ATGCTTGCAC GTGGAAATAC TAATTTCAAA ATGAGTGAAA TTTCTCAGCG CGCACATCTC
TCTAAAGGGG CGCTCTATTA CTATTTTTCT GATAGAGAAG CACTTTTGCA AGCAATCTTT
GATGAAAGTG TTGATGAACT TGCAAAAGAC ATTGCACGTT CAATTGAAAA TAAGCCTGCC
TCGGTAGAGA CACTTCATGC AATTGTCACA GAGCTTGCAT CCCATATTTT GCCAGACTCA
CCTTTGGTAT TGGCGCTTAT TAATAAGCTT GCTAGTTCAG AACAAGCCCT TATCACTAAT
ATTGAGGGCC CTCTTTCAAG GGTGGTGGTT TTACTTGTGA GTCAGCTTGA GCTTGGAAAA
GAGCGAGGAT TTGTTCGCAA AGACATTAAT TCAAGACTTG CTGCATGTTC TATTACAGGA
GCTCTTGTGC TTTCTGCCAT TGGTTTAATG GGAGAACGTC GCGGAGCAGA AGATTCTTCT
CAACTTTCGC AGGACCTTCT CAGTCTTATG CTTACCGGCA TTGGTTTAGA TGCCAAGACG
CATTAA
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| Protein sequence | MSEKNTDVVA DVMTYLAHAH NHTQEVVGTV AASVSHIRAE ARTKKSATTR KRIMHETTEL
MLARGNTNFK MSEISQRAHL SKGALYYYFS DREALLQAIF DESVDELAKD IARSIENKPA
SVETLHAIVT ELASHILPDS PLVLALINKL ASSEQALITN IEGPLSRVVV LLVSQLELGK
ERGFVRKDIN SRLAACSITG ALVLSAIGLM GERRGAEDSS QLSQDLLSLM LTGIGLDAKT
H
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