Gene Apar_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0469 
Symbol 
ID8413318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp537878 
End bp538243 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content47% 
IMG OID645022037 
Producthypothetical protein 
Protein accessionYP_003179491 
Protein GI257784274 
COG category[S] Function unknown 
COG ID[COG1302] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0486821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CAGAGCTTCG TATAGCGGGC ATCGGCATCT CAAAAGATGT AATTTCAACG 
GTTGTCTCCG GCGCAGCTGG AAATGTTGAA GGTGTTGCCT CCGTTGGCGG AAACGATACA
TTAGCATCTA ACCTTATCAA CGTCTTTACC AGCAGAAGTC TTGCTCCAGA GAAGGCTGTT
GAGGCAGGCG TAGAAAACGG TCAGCTTCAT CTTGGAGTTC ACCTTACCGT GTTTTATGGC
TATCCTTTTA CAAAGCTTGC CTCTGAGGTA AGACTTGCTG TTGCAACTGC AGTAAATGAG
CAGATTGGCG TTAGCATTGC CTCCGTTGAT GTTTACATTG ACAGCCTGGT TTTTCCTAAG
GAGTAG
 
Protein sequence
MAETELRIAG IGISKDVIST VVSGAAGNVE GVASVGGNDT LASNLINVFT SRSLAPEKAV 
EAGVENGQLH LGVHLTVFYG YPFTKLASEV RLAVATAVNE QIGVSIASVD VYIDSLVFPK
E