| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0456 |
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| Symbol | |
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| ID | 8413305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 524276 |
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| End bp | 525658 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022024 |
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| Product | protein of unknown function UPF0118 |
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| Protein accession | YP_003179478 |
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| Protein GI | 257784261 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.204189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAA AGCATCAAAA CTTTTCCGAT TCGATTCAGA GTTGGAAACA GCGTGGCCTG
ATGGTATGGA CAGCCATTGG CTTTGCTGCG TTGTTTGCAC TTGCACTGTA TGTCCTTGGT
ATTTTGGGGC AGGCCGTTGA GTTGTTGGCT ATTGGCGCTA TTGTTGCGTT TGTGTGCAGT
CCTGTAACTA ACTGGCTTGA AGATAGGGGA ATACCTCGCG GTATTTCTGC TTTTGCAGCA
CTTATTCTTA CACTTATTGT GTTTGTAGGA TTTTTGATTT TGATTGCTCA ACCATTGGTG
CTTGAGCTTA CCACGCTGCT TAAGAATGCT CCTTCGTATG CAAGCCAGAT AGGAGCAATG
GCTAGGGAAT TTTGGCAGAA CTTTGACTCT CAGAGTAACC CAGCTGTTAG ACAGACGGTA
GAGCTTGTAA TTGAGCGGGC ATCGAGCATT GGAATATCAG TTGCTTCTGG CATTTTAAGT
TGGCTTTCAA CATCTGCTTT AGGCAATATT TCATCTATGG CAAACCAGCT TATGGTCTTT
TTCTTGGGTC TAGTGCTTGC CTATTGGCTT GCCAAAGATT ATCCCGTTAT TGTTCGTGAG
CTGGCTATTA TTGCAGGTCC TCAAAAAGAG GATGAGTTCA GACTTATTCT TGCAATCTTA
AGCAGATCTA CCAGTGGATA TATGCGTGGA ACTATCATTA CCTCTGCAGT TAACGGCATT
CTTGTGTACT TTGGTTGCCT TATTTTAGGT AACCCTTATG CTGCCCTCAT TGGTATGGTC
ACAGGAATCT TCCACATTAT TCCTGTGGTT GGACCGGTTT TCTCGGCAGG CATTGCTCTG
ATTCTGAGTA TTTTGGTAGA CCCCATCATG ACCGTGTGGA CCATCGTTAT CTTGATGGTT
GCTCAAAACG TTGTGGATAA TGTGCTTTCA CCTTTGGTTA TGGCAACTAG CGTCAAAGTC
CATCCGGGTC TTTCACTTAT AGGCATTGTT ATTGGTAGCG CTCTTGGCGG AGTAGTCGGA
ACCATTCTTG CAATTCCACT GACTGCAGCA CTTAGAGGTA TTTTTGTGTA CTTCTTTGAG
AAGTACTCGG GCAGACAGAT TGTCTCACCA AATGGTGCGC TCTTTAATTC CACGCAGTAT
GTGGATGAGA AAGGCGCTAT TTTGCCAGAG TATGATGCAC TGGACGATCC AAAGTTTTTT
GAGGAGTCAC GTCTTGTTGA TCAAGACACT ACGGCTCATA TTCGTAGTAA GTCTTCAATT
CCTGCGCCAA AGATTCTTGG GCATGATTTT TCTCAGTTAC TTTTTAGGAA TACTCAAGAA
GTTATTAAAG AACCAGATAA ACCATCGTCA GATACGGTAG ACTCAGACAG TACAAAAGAG
TAG
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| Protein sequence | MDQKHQNFSD SIQSWKQRGL MVWTAIGFAA LFALALYVLG ILGQAVELLA IGAIVAFVCS
PVTNWLEDRG IPRGISAFAA LILTLIVFVG FLILIAQPLV LELTTLLKNA PSYASQIGAM
AREFWQNFDS QSNPAVRQTV ELVIERASSI GISVASGILS WLSTSALGNI SSMANQLMVF
FLGLVLAYWL AKDYPVIVRE LAIIAGPQKE DEFRLILAIL SRSTSGYMRG TIITSAVNGI
LVYFGCLILG NPYAALIGMV TGIFHIIPVV GPVFSAGIAL ILSILVDPIM TVWTIVILMV
AQNVVDNVLS PLVMATSVKV HPGLSLIGIV IGSALGGVVG TILAIPLTAA LRGIFVYFFE
KYSGRQIVSP NGALFNSTQY VDEKGAILPE YDALDDPKFF EESRLVDQDT TAHIRSKSSI
PAPKILGHDF SQLLFRNTQE VIKEPDKPSS DTVDSDSTKE
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