Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3942 |
Symbol | |
ID | 5376628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 4601453 |
End bp | 4602538 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640845466 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001381104 |
Protein GI | 153006779 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0243581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTCGG ACCTCGCCGA GTCGCTGGCG CAGCGCACCT CCGCCCTGTG CGCGATGCTC TCGCCCATCG GGCAGGAGCG CGCGCTCTGC GACGCCGTGG AGAGCTGGGC GCGGGGGCGC TTCCCGCGCG TCGAGCGGGT GAAGGACTCG CTCGTCGTGC GGGTGGACGG CGACGGCGGC CCCGGGCGGC CGACGGTGGC GCTGTGCGGG CACCTCGACA CGGTGCCCGT GCACGACGAG GACCGCCACC CGCCCCGCCG CGAGGGCGGC CGGCTGGTCG CGCCGGGCGC GTCGGACATG AAGGGCGGGG TCGCGGTCGC GATGGAGCTC GCCGAGCGGC TGCCGCGCGC GGCGCGCTTC TGCGATCTCG TCCTCGTGCT CTACGCGCGC GAGGAGGGGC CCTACCTCGA GAACGAGCTC GAGGACGTGC TGCGCGCGCC GGGGCTCCTC GCCGGCGTGG ACCTGGCGCT CTGCCTCGAG CCGACCGACA ACGTGCTCCA GCTCGGCTGC GTCGGCTCCA TCCACGCGAC GGTCACCTTC CACGGCCGCG CCGCGCACTC GGCCCGCCCG TGGCACGGCG AGAACGCCGT CCACCGCGCC GGGGCGCTCC TCGCCGAGCT GCACGCGCGC GCCGCGCGCG AGGCGACGAG CGGCGGGCTC CGCTTCCGGG AGGTGCTCTC CGCGACGCGC ATCGAGGGCG GGCGGGCGCG CAACGTGGTC CCGGACCGCT GCACCCTGAA CCTCAACTTC CGCTTCGCGC CGGATCGCTC CCTCGACGCC GCCGCGAGGG AGCTCGTCGC GATCGCCGCG CGCCACGGCG CCGAGACGGA GCTCACGGAC CTCTCTCCGG CCTGCCCGGC CTACGCGGAG CACCCGATCG TGAAGCGGCT GCTCGAGCGG ACCGGGATCG CCGTGGAGCC GAAGCAGGCC TGGACGGACG TGGCGCGGCT CGCGGTGCAC GGCATCCCCG CGGCGAACCT CGGCCCCGGC GCCACGAGCC AGGCGCACCA GCGCGGGGAG TGGGTCGAGC TCGCCGCGCT CGCGCGAGGC TACGAGATCT ACGAGCGGTT TCTCGCCGCC GAGTGA
|
Protein sequence | MSSDLAESLA QRTSALCAML SPIGQERALC DAVESWARGR FPRVERVKDS LVVRVDGDGG PGRPTVALCG HLDTVPVHDE DRHPPRREGG RLVAPGASDM KGGVAVAMEL AERLPRAARF CDLVLVLYAR EEGPYLENEL EDVLRAPGLL AGVDLALCLE PTDNVLQLGC VGSIHATVTF HGRAAHSARP WHGENAVHRA GALLAELHAR AAREATSGGL RFREVLSATR IEGGRARNVV PDRCTLNLNF RFAPDRSLDA AARELVAIAA RHGAETELTD LSPACPAYAE HPIVKRLLER TGIAVEPKQA WTDVARLAVH GIPAANLGPG ATSQAHQRGE WVELAALARG YEIYERFLAA E
|
| |