| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2108 |
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| Symbol | |
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| ID | 6274499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2568207 |
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| End bp | 2569166 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642614170 |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_001878698 |
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| Protein GI | 187736586 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.369089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCA GGACAACGCT CCTTTTTCCT ATTCTTTTTC TCTCACTTTC AGGATCCTCC
GTCATGGCGG CAACCCCTTG GGTTTCTGAC AGGAACTGGG AACTCGTTTT TGAAGACAAT
TTTGACGGCT CATCGCTGAA CGCACACAAC TGGAGCCGCA TTGATTACGT AGGCTATAAT
GCCCCGGACT GGCGCAAGTA CCAATCCCGG GACGAAAGCC TTGTGGAATT CCGGGAAAAG
GACGGCAACT CCGCCATGAC CCTGTGGGGA AAATACGGGG ACTACACCAC CCAAACCAAC
CAGACTGCCC CAGCCAGGAC ATACGCCTGC GGAGGGGTAT ATTCCCTGAA AACCTTCTCC
TTCCAATATG GATACGTAGA AGTCCGCGCC AGATTCGACT GTGTGCAGGG CGTCTGGCCG
GCCATCTGGA TGATGCCCAA ATCCGACAGC ATCGGCTGGC CTGTCGGAGG GGAAATTGAC
ATCATGGAAC ACCTGAATTA CGAAGGCCGT GTTTACCAGA CAATCCACTG GTCGCAAAAC
GGCGTTCCCA ACCAGGATAA CTCCCAGGGG GTCACCCCCG GTTGGAACGA TGGTGCCGAA
AAAGCAAACT GGCATACCTA CGGGATGGAA TGGACGGAAG AAGGCATCAC CTTTTATGTG
GATGGAAAAG CAACCGGTTC ATTCAAAAAG CCCAATAACG CAAACTGGCC CTTTGACAAG
GACGGAAACG AATTCTACCT GATCATCGAC CAGCAGATTG GAGGCAGCTG GGTGGAAAAC
GCAGGAGTTA ATAAGGGAAT CGACCAAAAT ACGCTGGCCA ATTCCGGAGC CGCATTCGAC
ATCGATTATG TCAAAGTCTA TTCCTCAAGC ATCTACAACC ACCTCGTTCC GGAACCCGCT
GTGGCTTCGC TGGGCCTGTT GGGAATGGCC TTGCTGGCGG CTCGCCGCAA AAGAAACTGA
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| Protein sequence | MFIRTTLLFP ILFLSLSGSS VMAATPWVSD RNWELVFEDN FDGSSLNAHN WSRIDYVGYN
APDWRKYQSR DESLVEFREK DGNSAMTLWG KYGDYTTQTN QTAPARTYAC GGVYSLKTFS
FQYGYVEVRA RFDCVQGVWP AIWMMPKSDS IGWPVGGEID IMEHLNYEGR VYQTIHWSQN
GVPNQDNSQG VTPGWNDGAE KANWHTYGME WTEEGITFYV DGKATGSFKK PNNANWPFDK
DGNEFYLIID QQIGGSWVEN AGVNKGIDQN TLANSGAAFD IDYVKVYSSS IYNHLVPEPA
VASLGLLGMA LLAARRKRN
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