| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2009 |
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| Symbol | |
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| ID | 6275770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2439325 |
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| End bp | 2440260 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642614068 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_001878600 |
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| Protein GI | 187736488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03639] CRISPR-associated endonuclease Cas1, NMENI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.515668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.104859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATACC ATATTCTAAG CATAGATGCC TATACATGCC ATCTGAGCTG CGACAAGGGC
CAACTCAGAT GCGCGGATGG AGAGAATTCT CCCCGAACGA TTCCGCTGGA GGATGTGGGG
GCTGTTGTGC TCAGTTCTTT TAAGGCGACG CTCACGAGCA ATTTGCTGAT AGAACTGGCC
AGGAAGAGAA TAGGATTTGT GCTGTGTGAA AGCTACAGGC CTGCCGTGCT GCTCCTGCCA
GCGGATCGGT CTACGGATAC CGGTCTGCTA AGACATCTGG CGGATATGCC GGCCCGTTTG
CGGAACCGCC TTTGGCAAAA GACTTTGGAT GCCAAGTGTG GGAATCAGAC GGCTCTGGCC
CAAGCATGGA ATCCGCATCA TCCCGCCATT GCGGAGCTGA AGAGAATGGC CGTGACGGAA
AAGACGGCGA GGGAAGCAGA GTGCGCCCGC CTGTTCTGGA GCGTATTTGC GGATACATGG
GCAAACTCCG ATTTTCGCAG GGGACGTCAT GAGGAGGGGT TTAATAACCT CTTCAACTAT
GCGTACGCTA TTCTGTTGTC TTGCATATTG CAATATCTCT TTGCTCTGGG GCTGGATCCC
TGCTTCGGCA TTTTTCATCA ATCCCGGGAA CATGCGGCGC CTTTGGCTTA TGATCTGATG
GAACCCTTCA GGCCTGCCTT TGACGCCAAT GTGGCCCGTT GGATTCATTT GTGCCTGCGG
GAAGGAAAAA CAGAAGAGAG AGCAGGAGAA ATCACCCGTG AGTTCAGGCA ACATATTACA
GCCACCTTGC AGGCTTCTGT CATGTACCGG GATAAACAGC TGCCGTTGAA AGCGGCGGTA
GAGGCCGTTT GCCGCAGTTT CCGCAAAGCA GTTCTTGCCG GACAATCCGA ACCGTATGAA
CCATGGCTTA TGACAACTAT AAAATGGGCT GGCTAG
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| Protein sequence | MSYHILSIDA YTCHLSCDKG QLRCADGENS PRTIPLEDVG AVVLSSFKAT LTSNLLIELA
RKRIGFVLCE SYRPAVLLLP ADRSTDTGLL RHLADMPARL RNRLWQKTLD AKCGNQTALA
QAWNPHHPAI AELKRMAVTE KTAREAECAR LFWSVFADTW ANSDFRRGRH EEGFNNLFNY
AYAILLSCIL QYLFALGLDP CFGIFHQSRE HAAPLAYDLM EPFRPAFDAN VARWIHLCLR
EGKTEERAGE ITREFRQHIT ATLQASVMYR DKQLPLKAAV EAVCRSFRKA VLAGQSEPYE
PWLMTTIKWA G
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