Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1975 |
Symbol | pgi |
ID | 6274872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2399524 |
End bp | 2401071 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642614037 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_001878569 |
Protein GI | 187736457 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.264146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00104607 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCATCA TGAGCTTATA CGCAAAACAA CTCGTTCGCT ACCCTGAACT GGGCATTTCC CTTGATTTTT CAAAACTTCC GCTGGACGAC GCATTCCTGT CTTCCATGCA GGGACGGATA GACAGGGCGT TTGCCGACAT GAAGGCGCTG GAATCCGGCG CCATCGCCAA TCCGGATGAA AAACGCATGG TGGGGCACTA CTGGCTGCGC AACTCCTCCC TGGCTCCCAC GCCGGAATTG AAAGCCGCCA TTGACGGCCC CCTGGCGGAC GTCAAAGCCT TCGGACGGGA CGTTCTGGAC GGCAAAATAA CGCCTCCCCG CGCGGAACAA TATTCCGCCG CCCTCGTCAT CGGCATCGGC GGTTCCGCTC TTGGCCCGGA GCTGGTGGCG GATGCCATTC CGGCGGCAGG GCTGGACATG TTCTTTCTGG ACAACACGGA TCCGGACGGC ATGTACCGGG TGCTGGAATC CCTCCCTCTG GAAGAAACGC TTGTCATTGT CATTTCCAAA TCTGGCGGCA CGCCGGAAAC CCGCAACGGC ATGCTGGTGG CCCAGGACTT CTTCAGGAAG AACGGGCTGG AATTCGCACC CCAGGCGGTC GCCGTCACGG GAACGGGTTC CCGGCTGGAC AAAACGGCTG AGGCGGAAGG CTGGCTCAGG CGTTTCCCGA TGGAAGACTG GGTGGGCGGC CGCACCTCCG TCATGTCCGT GGTAGGGCTG GTTCCCGCCG TGCTTCAGGG CGTGAACGTG GATGATCTGC TGGAAGGCGC GCGCCTGATG GACGAAAAGA CCCGCCGGGA CTGCGTGAAA TGCAACGCCT CCATGAAACT GGCGCTGGCC TGGTACAAGG CCACCGGCGG CAAGGGGGAA AAGGATATGG TGGTTCTCCC TTATAAGGAT GCCCTGGTGC TCTTCTCCAA ATACCTCCAG CAGCTCATTA TGGAATCCCT CGGCAAGCGG CTGGACCTGG AGGGCAACGA AGTCTGCCAG GGCATTTCCG TGTACGGCAA CAAGGGCTCC ACGGATCAGC ATGCCTATGT GCAGCAGCTC CGTGACGGCG TGAACAACTT CTTCGCCACC TTCATTGAAG TGCGCGAATG TTCCGCGGAT GCGGTGGAAG TGGAAGCGGG CGCCACCTGC GGAGACTTCC TCCAGGGCTT CCTGCGCGGC ACCCGCCAGG CTCTGGCGGA ATCCGGCCGT TCCTCCATCA CCATTTCCAT CCCGGAGGTG AACGCCAAAA CGCTTGGCAT GCTGATTGCT CTGTTTGAGC GCGCCGTCTC CTTCTATGCT TCCCTGGTCA ACATCAACGC CTACCACCAG CCCGGCGTGG AAGCCGGCAA AAAAGCGGCG GGTTCCTTCC TGGCCCTGCT GGGCAGGGTA AGGGGGGCTC TGGGAACCGC CCCGGAAACC GCCGCCCAGA TGGCTGCCCG GCTGGATGCG GACCAGGAAG CCGTGTACCA TTGCCTCGTG CATATAGCTT CCGGTGATTC CTCCGTCAAG TGGGTTCAGG CTGACTGTGC GGATGAAGAC ACCTTCTGCA AGGCATAA
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Protein sequence | MTIMSLYAKQ LVRYPELGIS LDFSKLPLDD AFLSSMQGRI DRAFADMKAL ESGAIANPDE KRMVGHYWLR NSSLAPTPEL KAAIDGPLAD VKAFGRDVLD GKITPPRAEQ YSAALVIGIG GSALGPELVA DAIPAAGLDM FFLDNTDPDG MYRVLESLPL EETLVIVISK SGGTPETRNG MLVAQDFFRK NGLEFAPQAV AVTGTGSRLD KTAEAEGWLR RFPMEDWVGG RTSVMSVVGL VPAVLQGVNV DDLLEGARLM DEKTRRDCVK CNASMKLALA WYKATGGKGE KDMVVLPYKD ALVLFSKYLQ QLIMESLGKR LDLEGNEVCQ GISVYGNKGS TDQHAYVQQL RDGVNNFFAT FIEVRECSAD AVEVEAGATC GDFLQGFLRG TRQALAESGR SSITISIPEV NAKTLGMLIA LFERAVSFYA SLVNINAYHQ PGVEAGKKAA GSFLALLGRV RGALGTAPET AAQMAARLDA DQEAVYHCLV HIASGDSSVK WVQADCADED TFCKA
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