Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1733 |
Symbol | |
ID | 6275427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2116335 |
End bp | 2116973 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642613796 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001878332 |
Protein GI | 187736220 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.128322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAACCA AGCCAACGAA GAATAATGAC GGAAATCGCC GCCGTGACCG CGGCGATCAG ACTCGGATCA ATGAACGGAT TCGCGCGCCC CGCGTGCGGG TAGTGACTGC CAACGGCGAC CAGCTGGGCG TCATGAACAC GCGCGACGCG CTGGAAAAAG CCAAGGCTCT GGGTCTGGAC CTGGTGGAAG TGGCCGGCAA TGCCGATCCG CCCGTATGCC GCGTGGTTGA TTACGGCAAG TACAAATACC AGCAGGCCAA GCTCCAGAAA AACAACAAGA GCCGAACCGT CAAGCTTAAG GAAATCAAGC TCCGCATCGG TACGGATACC AATGACTATA ATGTGAAAAT GGCCCGTACG GAAAGCTTCT TGGACCATGG CCACAAGGTC CGCTTCCAGC TCCGTTTCCG CGGTCGTGAG AACGCCCACC AGGAGCTTGG CTACGACGTC TTCAACAAAG TCATCGCGGA TATGAAGACC ATGGCGCAGG TGGATCAGGC CCCGCGTTTG GCCGGCAACA CCATGCACAT GGTGCTCTCC CCGCTCCCCG CCCAGCAGCG CGTGAAGAAA TTCACCGCCC ACCTGGATAA GGATTTTGAT TCCGAAGATT CCGCCTTTGA CGCGGAGGAT GACGAGTAA
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Protein sequence | MPTKPTKNND GNRRRDRGDQ TRINERIRAP RVRVVTANGD QLGVMNTRDA LEKAKALGLD LVEVAGNADP PVCRVVDYGK YKYQQAKLQK NNKSRTVKLK EIKLRIGTDT NDYNVKMART ESFLDHGHKV RFQLRFRGRE NAHQELGYDV FNKVIADMKT MAQVDQAPRL AGNTMHMVLS PLPAQQRVKK FTAHLDKDFD SEDSAFDAED DE
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