Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1637 |
Symbol | |
ID | 6274441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1977310 |
End bp | 1979034 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642613697 |
Product | alpha amylase catalytic region |
Protein accession | YP_001878238 |
Protein GI | 187736126 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACCC ATGGAGTTGA CTGGGGGAGC CGGGAAACGA ACGGGTGCGG AACTTTTAAT GGAGTGACGG ATAAAGCCTT ACGTGAAATA GCACGGATGG GTTTCACACA CATCTGGCTG ACCGGGGTAT TGAGGCACGC TACGCAGACG GCCCATCCCG GGCTGGCCGC CCAGCCGGAA TCCATCGTAA AAGGCCTGGC AGGAAGTCCC TATGCCGTGG TGGATTATTT TGACGTGGAT CCGGACCTGG CCTCCTCCCC GGAGAAGAGA ATGGATGAGT TCAAGGCTCT GGTAAAGCGT TGCCGGACGG TGGGGCTGCT GCCGATGATG GATTTTATTC CCAACCATGT TTCCCGAGCC TACCTGGCGG ACTGGGACGG GCATGACGAT TTTGGAGAAG GAGATGATCC CCATACGTTT TTTTCTCCGG AGCAGGGGTA CTTTTACCTG ACCTCCAACA GCCTTGGGGA CGGTCCACCC CTGCGTCTGC CGGACGGCCT GTTTGAAGGG GAAATGACGT TCGGCCGTGT GACGGGCAAC AATGCCGTTA CATGGAATCC CGGCAAGTAC GACTGGTATG AAACGGTCAA GCTCAACTAC GGCTATAACT TTATGGCCGG TCTTCCTGCC CTCCGCCTGT TGCCGGGGTG GACCAGCCCC AAGCAGCATG TGCCCAAGAC ATGGCGCATC ATGGACGATA TCCTTTCCTT CTGGCAAAGC CTGGGCATCG GCGGTTTCAG GTGCGACATG GCCCAAATGA TCCCCATGGC TTTCTGGAAA TGGGCCATTT CCCGTTCCCG GGTGCGTCTG CCGGACGTGT TTTTCATGGC GGAGGCATAC AACGACCACA TGAAAACCAC ACCCGGCGAT CCGTGCGCCG CCCTTCTGGA TGCCGGATTT AATGCCGTTT ACGATTCCGA CTGCTATCAT CTGGCGCTCC ATATGTACAC GGAAAATAAC TGGGCCAATG ACTTCGACCG GCTTTTCCGA AGCAATCCCA TATACATGAC CCACGGCGTC CGCTACGTGG AAAACCATGA TGAAACGCGC GTGTGCTCCC CTCTTTCCTG GGGCGGCGTG GGGCGCGTTG TTCTGCCGGC GGTCATGACG CTGGTGTATG CCTCCGGGAG CGGTCCCGTG CTGGTGTACA ACGGGCAGGA AGTGGGGGAA CGGGCGGAGG GGCCCGGCGG TTTCGGCGGA CATGACGGGC GTACCAGTAT TTTTGACTAT ACCTGCCTCC CCCGGCTCCA GCCCTGGGTG GCGGATGGCC GGTTTGACTC TTCCCTGTTG CCGGAAGAGT CCGCAGAACT GAGAAATTTT CATCGGAAGC TTCTTCCTCT GATGCAGCAT CCGGCGCTGG ACCGGGGAGA TTTTTACGGC CTGAACTGGG CTAATATGAA AAACACCACT TTCGGCAGGG AACCGGCGGA AGACACTTCC GGCCACTGGG TATATGCCAT GCTCCGGCAT GATGCCCGCG CCAGGGCCAC CGTGCTTGTG GTGGGGAACC TTTCTCCAAA TATCAATTTC TACAACCTGC GCATTTCCAT TCCCCAGCAC GCTTTCGGCT GGTGCGGCAT CCAGACGGAT CGGGTACGCG TCAGAAACCT GATGGACGCC GAGGGTGAGG ACAGGATTTT TGAGCGGCGG GAATTGATGG ACTGCGGTCT GTCCCATCCC CTGAAACCGG GACATGTGGG CGTGCTGGAA CTGTCTGCCG TTTAG
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Protein sequence | METHGVDWGS RETNGCGTFN GVTDKALREI ARMGFTHIWL TGVLRHATQT AHPGLAAQPE SIVKGLAGSP YAVVDYFDVD PDLASSPEKR MDEFKALVKR CRTVGLLPMM DFIPNHVSRA YLADWDGHDD FGEGDDPHTF FSPEQGYFYL TSNSLGDGPP LRLPDGLFEG EMTFGRVTGN NAVTWNPGKY DWYETVKLNY GYNFMAGLPA LRLLPGWTSP KQHVPKTWRI MDDILSFWQS LGIGGFRCDM AQMIPMAFWK WAISRSRVRL PDVFFMAEAY NDHMKTTPGD PCAALLDAGF NAVYDSDCYH LALHMYTENN WANDFDRLFR SNPIYMTHGV RYVENHDETR VCSPLSWGGV GRVVLPAVMT LVYASGSGPV LVYNGQEVGE RAEGPGGFGG HDGRTSIFDY TCLPRLQPWV ADGRFDSSLL PEESAELRNF HRKLLPLMQH PALDRGDFYG LNWANMKNTT FGREPAEDTS GHWVYAMLRH DARARATVLV VGNLSPNINF YNLRISIPQH AFGWCGIQTD RVRVRNLMDA EGEDRIFERR ELMDCGLSHP LKPGHVGVLE LSAV
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