Gene Amuc_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1617 
Symbol 
ID6274699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1944459 
End bp1946072 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content57% 
IMG OID642613677 
Productprotein of unknown function DUF1504 
Protein accessionYP_001878218 
Protein GI187736106 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGTA TTTGTCATTT CTTCAAAGTT CTGGCGCGCC GTGCGGGTCT GCTCACTGCC 
GTAGCTGCCG CCGCTTTTTT CCTGGGGGCT CCCGCCGGTG AAGCTTCGGC CCGCACGGCG
GCTCCCGCTT ATCCGGCCGC GGAAGTGGGG GGGGAATCCC AGTACAGCCA TTTTCCCATT
CCTCTCAATC ATTACAATCC GGTGCCGCCG GATGCCAGCC TGTACCAGGT GCTTAGTGAA
CGCAACAAGC AGTCCGGCGG TTTCAACCTG GCAGTGACGC TCGTTTTCTT CGGCGCTATT
ATCCATACGT TTCTGGCTGG CCGCTTTGAG CGTTATTCCC ATAAGCTGGC CCTGCGCTAT
AAGGAAAAGC TCAAGGAAAC CAACTTCCGC GTGATGCATC CGGAAGAGCG CCTCCCGGTT
TCCTTCGCGT CCGCCATTTT CCATTTTCTG GGAGAAGTGG AAGCCGTGTT CGGAATCTGG
CTTATCCCTT TCATGTTCGT GTGCTGGAAG TATTATTCCT TTGAGGATTT TTCCGCTTAT
TTGAATTATG ACTGTTCCTT CACGGAGCCG ATGTTCGTGA TGATTATCAT GATTATCGCT
TCTTCCCGCC CTATTTTCAA GCTGGCGGAA TATGTCGTGA ACTGCGGCGC CAGGCTTGGG
AAGGCCACGC CGGGCGCGTG GTGGATTTCC GTGATGTGCC TGGCTCCCTT GCTGGGGTCT
CTGATTACGG AACCTGCCGC CATGACGATC GGGGCCCTGA TCCTAAGCAA GAAATTTTAC
GACCTCAAGC CGAAGAAAAC CTTGATGTAC GCCACTCTGG GGCTTCTCTT CGTGAATATC
TCCATCGGGG GCACCCTGAC GCACTTTGCA GCTCCGCCCG TAGTGATGGT GGCGGAAAAG
TGGGACTGGG GGCTGGCTCA CATGATCCAG CATTTCGGAT GGAAGGCCGT TTCCGCCATC
GTCATTTCCA ATTTGGCGTA TTTTCTCCTT TTCCGCAGGG AGTTCGCCCG CCTGGCTTCC
CAGCAGAGGG AGTTCGACGA GTTTGACGAC GCCGTTCCCC AGTCCTGGGA AGACCGCAAT
GACAAGATAC CGTTGTGGGT GACCCTGGCG CATGTCTGCT TCCTGGTCTG GACGGTTCTT
TTTGCCCATG AGCCGGTCAT GTTCATCGGC AGTTTCCTGT TCTTTATCGG TTTCACATTG
GCTACGCCGC AATACCAGAA CCAAATGTCT CTGCGTGTGC CCATCATGGT GGGGTTCTTC
CTGGCGGGGC TGGTCATTCT GGGCGGCGTG CAGGCCTGGT GGCTGGAGCC GGTGCTGACG
CGGCTGGGGG ACTACGCCAT GGTCGGGGCT ACGCTGCTGA CGGCATTTAA TGACAATGCC
GCCGTCACTT TCCTGGCGTC TACGGTTCCC AACCTGCCGG AAGCCGTCAA ATATTCCGTG
GTGGCGGGTG CTGTGACGGG CGGCGGCCTG ACGGTCATCG CCAACGCCCC CAATCCGGCC
GGGCAGGCCA TTCTGGGTAA ATATTTCAAA GGCATCAATC CCCTGTGGCT GTTTGCCTGG
GCGGCTTTTC CCACTGCCAT CGTGTTTATT TTCTTCACCT GCTTCGGCCA TTAA
 
Protein sequence
MSCICHFFKV LARRAGLLTA VAAAAFFLGA PAGEASARTA APAYPAAEVG GESQYSHFPI 
PLNHYNPVPP DASLYQVLSE RNKQSGGFNL AVTLVFFGAI IHTFLAGRFE RYSHKLALRY
KEKLKETNFR VMHPEERLPV SFASAIFHFL GEVEAVFGIW LIPFMFVCWK YYSFEDFSAY
LNYDCSFTEP MFVMIIMIIA SSRPIFKLAE YVVNCGARLG KATPGAWWIS VMCLAPLLGS
LITEPAAMTI GALILSKKFY DLKPKKTLMY ATLGLLFVNI SIGGTLTHFA APPVVMVAEK
WDWGLAHMIQ HFGWKAVSAI VISNLAYFLL FRREFARLAS QQREFDEFDD AVPQSWEDRN
DKIPLWVTLA HVCFLVWTVL FAHEPVMFIG SFLFFIGFTL ATPQYQNQMS LRVPIMVGFF
LAGLVILGGV QAWWLEPVLT RLGDYAMVGA TLLTAFNDNA AVTFLASTVP NLPEAVKYSV
VAGAVTGGGL TVIANAPNPA GQAILGKYFK GINPLWLFAW AAFPTAIVFI FFTCFGH