| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1254 |
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| Symbol | |
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| ID | 6275595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1512812 |
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| End bp | 1514698 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642613311 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001877860 |
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| Protein GI | 187735748 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000727923 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCA CAGCATGGAT CATCATAGGC ATCTGCGCCG CCCTTCTGGG CCTGAATATT
TACATGGGCA ACAATAAAAA GGCTGAAACC GCCCCCATTC CCGCACCGCA GGCGGCTGCC
GCCGCAGCCA ATGCCCCGGT TGCCGGCGTC CGCCCCGGAG CCGGAACCTC CGCCCCGGAA
CAGGCCTCCG TCAACAAAGC CCTTGAAGAA GACAAAACCG CCCCGATCAC TCTGGTAGCC
ACGCAGGAAG TGAACGGGAG GCAGGAACCC TTCATCACTT ACACGTTCAA CCGCATAGGG
GGTTCCATCG GTACGGTTAC CCTGCACAAC GATATTGTGG ACTCCCAAAA AGTCGCGGAC
CATAATATCA CGATTAACGA AGCCCAGCAA CGGGGCATCG GAGAACTCGT TTTCAACATG
GACGCCACCC AGGATCCTTC CTATGACAAC ACCGTGTATA AGGAAGCGAA ACGCACGGCG
GACTCCGTAA CCCTGGAAGG CTATGACCCC GCACGGCAGC TTTTCATCTC AAAAACGTAC
ACCCTGCACC CCGTCAAAAA TCTGGAAGGG GAAGTATTGC CCGGCAGCAA ATATCTCATT
CGCCTGACCG TCTCCCTGCT CAATAAATCT CCCAATGTCC AGGATCTGCG CTACATGGGC
ATCTTCGGCG GGAGCGCCTA TCCTATCGCC AAAAGCGAAC CAAAAGATAC CTACACCCAT
TTCTTTTACC ATGCAGACGG CTCCCTGGAA CAGGAAGTGC CTTCCTATTT CACAGGCGGC
TTTTTCAGCA GTGCCAAGGC CCGCGTCCTG GAAGGCCCTC TCCAGGACCT GACTTATGCC
GGCGTCATGA GCCAGTATTA CGCCACCATC CTTCTTCCCC AGGACCAGTC CAGGGGGTCC
ACCGTGTACG CCACCCGCCA GGAATTTCCT TTGACGCATG AAGGCAACAC CCTGGTGCCC
GGCGTCACCG TGGCCATGGG AATCCCCAAT CTGACCATGG CCCCCAATGA AATCAAGACG
CTCACCTACG ATATTTACAC CGGCCCCAAA TTCAACGCCT ACCTGCGTGA CCTGAATCTT
TCCTATCCCG CCATCAGCGA TATCATGGCA TACGGCTGGC TCGTATTTCT GAGCGTTCCG
ATGAACTGGC TGCTCAACCT CTTCCACGGA TGGTTCGGCA ACTGGGGCGT GGCCATCATC
TGCATGACCA TCGTTGTCCG TGCTCTCATC TGGCCGCTGC ACAAAAAATC CTATATGGCC
ATGAAACGCA TGTCCCTGGT TCAGCCGGAG ATGGTCAAAC TCAAGGAGAA ATATCCGGAC
GACCCTCAGA AGGTGAACAT GGAAATGATG AAGCTGTACC AGAAATACGG CATCAACCCG
GCCAGCGGCT GCGTCCCCAT GCTTATCCAG ATTCCCATTT TCTTTGCCTT TTACCGTGTG
CTCCAGTATT CCGCAGAACT GAGGGGGCAG CCCTTCTGCC TGTGGATGAC GGACCTTTCC
CTGCCTGATA CCGTGGGCCA CCTGTTCGGC GTTCCAATCA ATATTCTGCC TCTCATCATG
GCCGTAACCA TGATTATCCA GATGAGGATG ACGCCTCAGG CGGGGGAACG CTCCCAGCGC
ATTATTATGA ACCTGATGCC TGTGATGTTC TTCCTGTTCT GTTACAATTT CGCTTCCGCC
CTGGCCCTGT ACTGGACCAC GCAGAATTTG ATCTCCATAG GACAAACGGC CCTTATCCGC
CGCTTGCCCA TGCCCGTGCT TTCCCCCGCC AAAAAGAAAA AGTCGGGCTT TTTCCAAAAG
ATGATGGAGC AGCAGCGTGC GGCCCTGGAA GAACAGCAGC GCAAAGCTAA AGGCCGCAAC
ATGCGCAATA TAACGCCTAA AAAGTAG
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| Protein sequence | MDRTAWIIIG ICAALLGLNI YMGNNKKAET APIPAPQAAA AAANAPVAGV RPGAGTSAPE
QASVNKALEE DKTAPITLVA TQEVNGRQEP FITYTFNRIG GSIGTVTLHN DIVDSQKVAD
HNITINEAQQ RGIGELVFNM DATQDPSYDN TVYKEAKRTA DSVTLEGYDP ARQLFISKTY
TLHPVKNLEG EVLPGSKYLI RLTVSLLNKS PNVQDLRYMG IFGGSAYPIA KSEPKDTYTH
FFYHADGSLE QEVPSYFTGG FFSSAKARVL EGPLQDLTYA GVMSQYYATI LLPQDQSRGS
TVYATRQEFP LTHEGNTLVP GVTVAMGIPN LTMAPNEIKT LTYDIYTGPK FNAYLRDLNL
SYPAISDIMA YGWLVFLSVP MNWLLNLFHG WFGNWGVAII CMTIVVRALI WPLHKKSYMA
MKRMSLVQPE MVKLKEKYPD DPQKVNMEMM KLYQKYGINP ASGCVPMLIQ IPIFFAFYRV
LQYSAELRGQ PFCLWMTDLS LPDTVGHLFG VPINILPLIM AVTMIIQMRM TPQAGERSQR
IIMNLMPVMF FLFCYNFASA LALYWTTQNL ISIGQTALIR RLPMPVLSPA KKKKSGFFQK
MMEQQRAALE EQQRKAKGRN MRNITPKK
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