Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0248 |
Symbol | |
ID | 6275265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 306253 |
End bp | 306834 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612296 |
Product | nitroreductase |
Protein accession | YP_001876872 |
Protein GI | 187734760 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.167027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.791658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ACCTCCTTTA CCTGCTCGCA GCGGGGCTGT CCGGAACAGC CTTCCTTCAC GCCGCGGATA CCGTCAAACT GGACCAGCCG GACCTGGAAC GGGGAGCTCC GATCATGAAA GCCCTGTCCG ACCGTCAATC CATTCGGAGC TTTTCTGAAA AAGCGCTATC CCAAAAAGAT TTATCAGACC TGCTCTGGGC GGCCAATGGC ATCAACCGTC AGGAATCCGG CAAACGTACA GCCCCGTCCG CCATGAACCG CCAGGACGTT AAAATTTATA TATGCACTAA AAACGCCTCC TACCTCTATG ACCACAAGGC CCACGCCATG ATTCCCGTAA ACGATGGGGA CGTGCGCCCG GCGGATGCCC CCATATGTCT CATTCTTGTA ACGGATACGG CGGAACCCTG GGCTGCCATG GACGCTGGCA TTGTCTCCCA GAACATCTCC CTGTTCTGCT CCGGGACGGG ACTGGCTACC TATCCGCGCG CCAGCATGAA CAAGGATGCC CTGGCAAAGG CCCTGAAACT AACCTCTCCC CAAACACCCA TGCTCTGTCA TCCGGTAGGA TATAAAAAAT AA
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Protein sequence | MKKNLLYLLA AGLSGTAFLH AADTVKLDQP DLERGAPIMK ALSDRQSIRS FSEKALSQKD LSDLLWAANG INRQESGKRT APSAMNRQDV KIYICTKNAS YLYDHKAHAM IPVNDGDVRP ADAPICLILV TDTAEPWAAM DAGIVSQNIS LFCSGTGLAT YPRASMNKDA LAKALKLTSP QTPMLCHPVG YKK
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