Gene Amuc_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0248 
Symbol 
ID6275265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp306253 
End bp306834 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content55% 
IMG OID642612296 
Productnitroreductase 
Protein accessionYP_001876872 
Protein GI187734760 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.167027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.791658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA ACCTCCTTTA CCTGCTCGCA GCGGGGCTGT CCGGAACAGC CTTCCTTCAC 
GCCGCGGATA CCGTCAAACT GGACCAGCCG GACCTGGAAC GGGGAGCTCC GATCATGAAA
GCCCTGTCCG ACCGTCAATC CATTCGGAGC TTTTCTGAAA AAGCGCTATC CCAAAAAGAT
TTATCAGACC TGCTCTGGGC GGCCAATGGC ATCAACCGTC AGGAATCCGG CAAACGTACA
GCCCCGTCCG CCATGAACCG CCAGGACGTT AAAATTTATA TATGCACTAA AAACGCCTCC
TACCTCTATG ACCACAAGGC CCACGCCATG ATTCCCGTAA ACGATGGGGA CGTGCGCCCG
GCGGATGCCC CCATATGTCT CATTCTTGTA ACGGATACGG CGGAACCCTG GGCTGCCATG
GACGCTGGCA TTGTCTCCCA GAACATCTCC CTGTTCTGCT CCGGGACGGG ACTGGCTACC
TATCCGCGCG CCAGCATGAA CAAGGATGCC CTGGCAAAGG CCCTGAAACT AACCTCTCCC
CAAACACCCA TGCTCTGTCA TCCGGTAGGA TATAAAAAAT AA
 
Protein sequence
MKKNLLYLLA AGLSGTAFLH AADTVKLDQP DLERGAPIMK ALSDRQSIRS FSEKALSQKD 
LSDLLWAANG INRQESGKRT APSAMNRQDV KIYICTKNAS YLYDHKAHAM IPVNDGDVRP
ADAPICLILV TDTAEPWAAM DAGIVSQNIS LFCSGTGLAT YPRASMNKDA LAKALKLTSP
QTPMLCHPVG YKK