Gene Amir_6849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6849 
Symbol 
ID8331069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7985690 
End bp7986457 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content74% 
IMG OID644947281 
ProductABC transporter related 
Protein accessionYP_003104491 
Protein GI256380831 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.603639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCGC TCATCGAGGT CGACGGCATC GGCAAGACCT ACGGCAGCGT GGACGCGCTG 
CACGACGTGT CCGCGACCGT CGAGGCCGGG AGCGTGACCT GCGTCCTCGG CGACAACGGC
GCGGGCAAGT CCACCCTGAT CAAGATCCTG TCCGGGGTGC ACCGGCACGA CCGGGGCCGC
TTCCTGGTCG ACGGCACCGA GGTGCGCTTC TCCTCCCCGC GCGACGCGCT CGACCACGGC
ATCGCCACCG TCCACCAGGA CCTCGCGGTG GTGCCGCTGA TGAGCGTGTG GCGCAACTTC
TTCCTCGGCT CCGAGCCGCG CAGGGGCCCG TTCCTGGACC GCCGCGCCGC CCGCGAGACC
ACCAGGGAGG CGCTGGCGGA GCTGGGGATC GAGCTGCGCG ACGTCGAGCA GCCGGTCGGC
ACCCTGTCCG GCGGCGAGCG CCAGTGCGTG GCCATCGCGC GGGCGGTGCA CTTCGGCGCC
CGCGTGCTCA TCCTGGACGA GCCCACCGCA GCCCTCGGCG TCAAGCAGGC CGGGCTCGTC
CTGCGGCACG TCGCCCGCGC CCGCGACCGG GGCCTCGGCG TCGTCCTGAT CACCCACAAC
CCGCACCACG CGCACCCGGT CGGCGACCGG TTCCTGCTGC TCCAGCGGGG GCGCGCGGTC
GGCTGGCACG ACAAGTCCGA GATCGGCCTC GCCGAGCTGA CCGAGCGCAT GGCGGGTGGC
GCGGAGCTGG CCGAGCTGGA GCACGAGCTG CGCGGGACCG ACCGGTGA
 
Protein sequence
MTALIEVDGI GKTYGSVDAL HDVSATVEAG SVTCVLGDNG AGKSTLIKIL SGVHRHDRGR 
FLVDGTEVRF SSPRDALDHG IATVHQDLAV VPLMSVWRNF FLGSEPRRGP FLDRRAARET
TREALAELGI ELRDVEQPVG TLSGGERQCV AIARAVHFGA RVLILDEPTA ALGVKQAGLV
LRHVARARDR GLGVVLITHN PHHAHPVGDR FLLLQRGRAV GWHDKSEIGL AELTERMAGG
AELAELEHEL RGTDR