| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6814 |
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| Symbol | |
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| ID | 8331034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7951977 |
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| End bp | 7955987 |
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| Gene Length | 4011 bp |
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| Protein Length | 1336 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644947246 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003104456 |
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| Protein GI | 256380796 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGCA GCGGCGGTCT GAGCGTGTCG GATCTGCTGG AACAGCACAG CCGCACGAAC
ATCCCGCGTC CCATCCCGCC GGGCCAGTCG GACTCCGGTC CGCAGCGCGG CGCCGCACCG
GAACCGTCCG GTCGCCGCGC CGCGCCGGAG CCACCCGCCC ACCGATCCGA GCCGCAGGGC
CCGGAGAGCG GTCGCCAGCA GGGCGACCAC GAGCACCGAC CAGCGCAGGA GCCGCAGCAG
GGCCGCAGGA GGGCCGCCAG GGGACCCGAG GACGACGTCC AAGGTCCGTC CCACCCCGCC
GGACCCGGCC AACCGGGTGA GACGGGCCCG CGCACCGGCC GCAGGGCCAG GCCGGAGCCG
TCCGCGTCCC CGGAGCCGTC CGCGTACGAG GAGGAGACGC GGTACGCCGC CCCCGTGCGC
GTCGAGCCGG ACCCGGCCGC CGAGGCGGGC GGACGGCGCG CCAGGCACGA CGAGGCCCCT
TCAGGTCGCC GCGCGGCCCC CGAGGAGCCC AGGACCGGCA GGCGCGCCGC GCCGGAGGCC
GACCGCGACG CCGCCGCGCC CGAAGGCGTC TCGCGCGCGA GCAGGCGCGC GCGTCACGAC
GAGCCCGCGC CCTCAGGCAG GCGTTCCGCC CCCGAGGACG GCGTCCCGGC CCACGAGGAG
GAGCCCGGTC GCCGAGGCCG CCAGGCTCCC GATGAGGGGG TCGGGCGGCG GTCCAGGGCG
GTCGCGCCCG AGGACGGCTT CGCCGAGGAG GGCGGGCGCC ACGAGCCCGC CGCCCGCAGG
GGCCGCTCCT TCACCGACGA GGCCCCGTGG CCGCAGGCCG CCGACCGGCG CAGGCCGGAC
GTCCGGGGCG ACGAGGGCCT GGAGGACGCG GGCGAGGAGT CCGCGTCCCG GATGTCCAGG
CTCGCGCCCG GTGAGCCGAA CGGCCGCAGG TCGCTGCCCC CGCGCGGCCC CGAGGTCGAC
GGCCGGGGCC AGCGCGGTCC CGGTCCCGAG GCCACCGGCC GCAGGGCCAG GCCGGACGCG
GGGCCGCAGG GTCCCGACGC CACCGGTCGC CGCGCGCGCC CCGAGGTCGA CGGCGGTCCG
CAGGACGGTC CCCGCAGGCC GGGGCCCGGC GGGCCGGTCG ACGGCCCGCC CGGTGGCCCG
CTCGCCGGTC CGCCGAGCGG TCCGCCTCCC GGTGGTCCGC GCAGGCCCGG TCCCGACGGC
GCGGGGATGC GCCCGCGCCC GGCTCCCGGC CCGCCCGGCG AGGACTTCGA GGACGGCCCC
CGCAGGGGCC CGGAGGGCAC CGGCACGCGT CCGCGCCCGA TGCCCGGCGA CGGCTTCGGT
CCCCCCGGCC TGCCCGAGGA CGGCCCCCGC AGGGGTCCCG AGGGCACCGG GATGCGGCCC
AGGCCGATGC CCGGCGACGG CCCAGGCCTG CCCGAGGACG GTCCGCGCCG CGGTCCCGAG
GGCACCGGCG TGCGCCCGAG GCCGATGCCC GGCGACGGCG GCCCGCTCGG TCCCGGCCCG
GACGGCGCCG GTCCCCGCTC CCGCCCGGTC CCGCCGGACG GCAGCAGCAC CCGGATGCCG
CGCCCGATCC CCGAGGACGG CCCCCGCAGG GGTCCCGAGG GCACCGGCAC GCGTCCGCGC
CCGATGCCCG GCGACGGCCC CGGCCTGCCC GAGGACGGAC CCCGGTCGCG CCAGGCCAGG
CTCGCGGGCC ACGACGGCCC GCCCGCCGGT CCGCCGGTCG GCCCGCCGGT CGGCCCGCCG
GTCGGTCCAC GCCGCCCCGG TCCCGAGGGC AGCAGCACCC GGATGCCGCG CCCGATGCCC
GGCGAGGACT TCGAGGACGG CTTCCGCGGC CTGCCCGAGG ACGGTCCGCG CCGCGGTCCG
GAGGGCACCG GGATGCGTCC GCGTCCCATG CCCGGCGACG GCCCCGGCCT GCCCGAGGAC
GGCCCCCGCA GGCTCGCGCC CGGCGACGGC CCCGCGTCCG ACGGCAGGGG TCCGGACGGC
AGGGGTCCCG ACGGCAGGGG TCCCGACGGC GCCGGGATGC GCCCCAGGCC CGTCCCGCCC
GGCGACGACC GCCAGGCGCG CGCCGAGAGC TTCGCCGACG GCGACACCGG CAGGCCCCCG
CGCAGGCTCG CGCCCGAGAA CGGGCGGCAG GGCCCGCACG ACGGTCCCCC CAGCCGGTTC
GCCGAGGGCG ACGAGGGAGC CCCGCCGCTC CCGCCCCCCG GCGTGTCCGC GCTCGGCGGC
CCCCCGCCCG GCGTCGGCGG CCCCGAGCCG AGGGAGCAGA TCGACCCCGC GAGCCTCACC
ACCGAGATGG AGGCCATCAG CGACGACATC AAGAAGCTGC GCGAGGTCGA CCACACCCTC
GCCCGCTTCT CGGCCGTCCA CGACGAGCTC GCCGAGCAGG AGCGCCAGCG CAAGGAGCGC
AGGCAGAAGC TGATGCCGTG GAAGTCCGAG GTCGACGAGG ACGCCACGGA GTACGCCGAG
CCGGTGGACC CGGACGACCC CGACGACCCG GAGCCCAAGG GCGGCAAGGG TGGGAAGGGC
CGCAAGGGGC GGACCGCCAA GCAGAGCAAG ATCGTCCGGA TCATCAAGGC GATCTCGCTG
ACCTCGGCGG TGGTGGTGTT CCTGGCCAGC GGGATCGGCT GGGGGGCGAT GCTGCACTTC
GACAGCAAGA TCACCCGGAT CGACGCGCTC GGCCAGAACT CGGCGGCCGT GCACCAGGCG
GAGAAGCAGC TCGGTGACGA GAACTTCCTC ATCGTCGGCT CGGACACGCG CGCGGGCGCC
AAGGACACGG ACGGGGTGGG CGACACCAGC GAGGTCGTCG GCGCCCGGTC GGACGTGATG
ATGATCGCCC ACGTCCCGGC CGACCGGAAG CGCATGGTGG TGGTGTCGAT GCCGCGTGAC
CTCCAGGTCA CGCGGCCCGC GTGCAACAGC TGGGACTCGG CCAGCGACAC CTACTCGGAC
AAGGTGCTGC CCCAGGCGGA GGGCGTGAAG GCCAACGAGG TCTACGCCAC CGGCGGCCCG
CAGTGCGTCA GCAAGTTCAT GACCGAGCTG AGCGGGCTGG ACATCAACCG CTTCGTCAGC
GTGGACTTCA ACGGCTTCAA GGGCATGGTC GACGCCGTCG GGACGGTGGG CGTGTGCGCG
CCCACCGTCA TGGACGACGG CGAGCTGGGC ATGATCTTCG ACAAGCCCGG CAAGTACGAG
GTCGACGGCC AGAAGGCGCT GGACTTCGTC CGCGCCCGCA AGGTCAAGAC CGAGGAGTTC
GGCGACTACG ACCGGATCAA GCGGCAGCAG CAGTTCCTGT CCGCGCTGCT GCGCAAGGCC
ATGTCCAGCG AGCTGCTGCT CAGCCCGAGC AAGCTCAACG GCTTCCTCAA CGCCTTCGCG
TCCTCCACCG CGGGTCAGAA CATCGGCGTG GACTCCATGC TGACGCTCGC CCAGTCCCTG
CAGGGGCTGG ACGCCGGGCG GGTCAGCTTC GTGACCGTCC CCCACCGCAC CGACGAGGGC
CCGACCCCGA GCAACGACGA CAACTTCGAG GTCCTCCAGG AGGACGAGAC CAAGGCGCTC
TTCCAGGCGG TCATCGACGG CACCCCGCTG CCCGGCGAGG CCCCGACCGA GGGCGGGACC
ACCGAGAAGA AGGCCGAGAA GCAGCCGGGC ACCGTGGGCG ACCCCGGTTC CGTGCGCGTC
CAGGTGTTCA ACCAGACCTC GGGTGGGTTC GCCCCGAAGA ACACCAAGAC CAAGCTGGAA
GAGGTCGGCT TCAAGGTCAC CTACATCGGT GTCGCCCCCC AGGCGTCCAC CAGGACGTTC
ATCCGCTACG CCACCGGCAA CGAGAACGCC GCCGCGACCC TGCGGGCGGC CGTCCCGGAC
GCCGAGCTCC AGGTCGACGA GAGCATGGGC GGCGTCGTGG CGCTCATGAT GGGCTCCGAG
TGGGAGGGCG CCGTCGAGCG CCCCCGGGCC GGTCAGGGCG GCGGCGTCTC CGCCGACAGC
GGCGCCGGGG ACCTGCCCGT GGTGAACGCG GCCGTCGACC CCTGCGCGTG A
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| Protein sequence | MEGSGGLSVS DLLEQHSRTN IPRPIPPGQS DSGPQRGAAP EPSGRRAAPE PPAHRSEPQG
PESGRQQGDH EHRPAQEPQQ GRRRAARGPE DDVQGPSHPA GPGQPGETGP RTGRRARPEP
SASPEPSAYE EETRYAAPVR VEPDPAAEAG GRRARHDEAP SGRRAAPEEP RTGRRAAPEA
DRDAAAPEGV SRASRRARHD EPAPSGRRSA PEDGVPAHEE EPGRRGRQAP DEGVGRRSRA
VAPEDGFAEE GGRHEPAARR GRSFTDEAPW PQAADRRRPD VRGDEGLEDA GEESASRMSR
LAPGEPNGRR SLPPRGPEVD GRGQRGPGPE ATGRRARPDA GPQGPDATGR RARPEVDGGP
QDGPRRPGPG GPVDGPPGGP LAGPPSGPPP GGPRRPGPDG AGMRPRPAPG PPGEDFEDGP
RRGPEGTGTR PRPMPGDGFG PPGLPEDGPR RGPEGTGMRP RPMPGDGPGL PEDGPRRGPE
GTGVRPRPMP GDGGPLGPGP DGAGPRSRPV PPDGSSTRMP RPIPEDGPRR GPEGTGTRPR
PMPGDGPGLP EDGPRSRQAR LAGHDGPPAG PPVGPPVGPP VGPRRPGPEG SSTRMPRPMP
GEDFEDGFRG LPEDGPRRGP EGTGMRPRPM PGDGPGLPED GPRRLAPGDG PASDGRGPDG
RGPDGRGPDG AGMRPRPVPP GDDRQARAES FADGDTGRPP RRLAPENGRQ GPHDGPPSRF
AEGDEGAPPL PPPGVSALGG PPPGVGGPEP REQIDPASLT TEMEAISDDI KKLREVDHTL
ARFSAVHDEL AEQERQRKER RQKLMPWKSE VDEDATEYAE PVDPDDPDDP EPKGGKGGKG
RKGRTAKQSK IVRIIKAISL TSAVVVFLAS GIGWGAMLHF DSKITRIDAL GQNSAAVHQA
EKQLGDENFL IVGSDTRAGA KDTDGVGDTS EVVGARSDVM MIAHVPADRK RMVVVSMPRD
LQVTRPACNS WDSASDTYSD KVLPQAEGVK ANEVYATGGP QCVSKFMTEL SGLDINRFVS
VDFNGFKGMV DAVGTVGVCA PTVMDDGELG MIFDKPGKYE VDGQKALDFV RARKVKTEEF
GDYDRIKRQQ QFLSALLRKA MSSELLLSPS KLNGFLNAFA SSTAGQNIGV DSMLTLAQSL
QGLDAGRVSF VTVPHRTDEG PTPSNDDNFE VLQEDETKAL FQAVIDGTPL PGEAPTEGGT
TEKKAEKQPG TVGDPGSVRV QVFNQTSGGF APKNTKTKLE EVGFKVTYIG VAPQASTRTF
IRYATGNENA AATLRAAVPD AELQVDESMG GVVALMMGSE WEGAVERPRA GQGGGVSADS
GAGDLPVVNA AVDPCA
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