| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6527 |
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| Symbol | |
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| ID | 8330739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7667432 |
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| End bp | 7668685 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644946955 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_003104173 |
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| Protein GI | 256380513 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.627165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGG CGGGTGTCGA GGAGACGCTC AAGGACTTCT GGGTCAGCAG GCCCAGGCGG
CCCCAGGGCG GGCGGAAGGT CGCCGGGGTC GCCGCGGGAA TCGCGGGGCG GTACCAGCTG
GACCCGGTGA TCGTCCGGGT CGCCTTCGTG GCGCTGGCGC TGTGCGACGG CGCGGGGGTG
CTGGTCTACC TGGCCGGGTG GCTGCTGCTG GCGCAGGTGG GCGACGAGGT GTCGCCGCTG
GAGGCGCTGG TCGGCCGGGG GCGCAGCTCG ACGCCGGCCG CGGTGACCGT GCTGCTCGCC
CTCGCCGGGC TGCCGGTGTC GGGGCTGCTG TTCAACGGCG GCTTCGCGCT GGTGTCGGGC
CTGGCGCTGT CGCTGGGCGC GGTCTACCTG CTGCACAGCT CACGGGGCGC GGAGAACCGC
CCGGTGCCGA CGGCGCCGGG CCGCAGGGAC TTGGGGGCCG CGCGAGCGGC GGGCAGTGAC
CAGGAGGTGG GTGTGGACGA GCGGGGGACG GCGGAACCGG TCAGGCCGCC CGCGTGGGAC
CCGCTGGGGG CGGCTCCTTT CGCGTGGGAC CTCCCGGAGC CGGGAGCGGA GCGGGCGACC
GCCGTGGCGG AGCGGCCCGA GGCGGCGGTC CCGTGCAGGC GCAGGCGTTC GCGGGTGGGG
CCGCTGACGT TCGGCGCGGC GATGGTGGTG CTGGCGGCGT CGATCGTGGC GGCCGAGCAC
GACCCGTGGT TCACGCCGCC GCACGTCGCG GGCCTGCTGG TGGGCGTGCT GGGGCTGGGG
ATGCTCGTCG GCGCGCTGAC CGGGGGCGGC GGCAAGGGGC TGATGTGGCT GGCGGTGCCG
CTGAGCGCGG TGGGCGTGCT CGCGTCGGCC GCGGGCTTCC AGGACTTCCG CGACTTCGAC
GGCCCGGCCG GGTCGATCAC GGCGGTGCCG GTGTCGGTGG CCGAGCTGGA GCCGAGCTAC
GAGTTCGGCG CGGGCGAGGT GGACCTGGAC CTGGTGGGCC TTCCCGAGGG CGAGACGGCG
CGCACGACCG TGCGGCTGGG CGCGGGCACC ATCCGGGTGC GGGTGCCCAG GAACGCGGAC
GTGGTGGCGA CCTGCCACAC CAACGTGGGC GTGGTGACGT GCCTGGACCA GGAGCGGCAG
GGCAGGCAGC AGACGGTCAC CGTGGACGAG AACGGCCCGG ACGGGCCCGG TGGCCTCAGG
GTGGAGCTGG ACCTGCGGAC GAGCTTGGGA GAGGTGGCGG TGACCCGTGA GTGA
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| Protein sequence | MSAAGVEETL KDFWVSRPRR PQGGRKVAGV AAGIAGRYQL DPVIVRVAFV ALALCDGAGV
LVYLAGWLLL AQVGDEVSPL EALVGRGRSS TPAAVTVLLA LAGLPVSGLL FNGGFALVSG
LALSLGAVYL LHSSRGAENR PVPTAPGRRD LGAARAAGSD QEVGVDERGT AEPVRPPAWD
PLGAAPFAWD LPEPGAERAT AVAERPEAAV PCRRRRSRVG PLTFGAAMVV LAASIVAAEH
DPWFTPPHVA GLLVGVLGLG MLVGALTGGG GKGLMWLAVP LSAVGVLASA AGFQDFRDFD
GPAGSITAVP VSVAELEPSY EFGAGEVDLD LVGLPEGETA RTTVRLGAGT IRVRVPRNAD
VVATCHTNVG VVTCLDQERQ GRQQTVTVDE NGPDGPGGLR VELDLRTSLG EVAVTRE
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