Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6330 |
Symbol | |
ID | 8330541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7420144 |
End bp | 7424043 |
Gene Length | 3900 bp |
Protein Length | 1299 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644946759 |
Product | glycosyltransferase-like protein |
Protein accession | YP_003103978 |
Protein GI | 256380318 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.14602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCACG GCACCCCTGC TCCGCGCACC GCGCCGGTGC TGGCCGTGCT GGTGTGCCAT GACGGTGAGC GCTGGCTGGG GGAGGCCCTG GCCGCGCTGC ACGCCCAGCG ACCCGCGCCC AGGCACGTCC TGGCCGTGGA CACCGGCTCG CGCGACGGCA CGGCGGCTTT GCTGGCCGCC GCGTCGGCGG GGGCCGGGGG CGTGCCGTCC AGCGGTGTGC CCTCCGGAGT CGTGCCTGCC GGGGCCGCTC CTTCGTCCGC ACCTCCCGCG TCCGCACCTC CCGCGTCTAC GACTGCGCTG GTCGGGGCTG CGGTGGTCAA GGCTGCGGCG TCCGGGGGCG CCGGGATGCT CCGCGCCGGG CCGCTCCGCG CCGGGCTGCT CAGCGGTGTG CTGACCCTGC CCAGGTCCAC CGGTTTCGCG GAGGCGGTAC ACGCCGCCGT GGCGCACGCC GAGGAGCGCT GGGGCGATCC GGGCGCGTGG GTGTGGGTGC TGCACGACGA CAGCGCGCCC GAACCCGGCT GCCTGGCCGC GCTGCTCGCG ACCGCCGAGA TCGCCCCGTC CTCGGCCGTG CTGGGGCCGC TGGTGGTGGA CTGGGCCGAT CCGAGGGTGG TGGTCGAGGC CGGGCTGTCG ACCGACGCGT CGGGCCAGCG CCAGACCGGT GTGGGCCGGG GCGAGCCGGT GGGCGCGTTC GAGCGGACCT CGGAGGCGCT GGCGGTCGGG TCGGCGGGAT CGCTGGTGCG CCGGTCGGCG TGGACCGGGC TGGGCGGCTA CGACCGCGCG TTCGGCCTGG TGGGGGAGGA TGTCGACCTG GGCTGGCGCG CCAACCTGGC GGGCCACTCG GTGCTGCTGG CGCCTGCGGC CCGCCTGCGC CACGCCAGGG CCCTGACCAC CGGCGAGAGA CTCCTGGAAC CGGACGGCCC CGGTGTCGGC GACCGGCCGA GACCACCGGG AACGCCCCTC GCTGGTGCTG GTGCTGGTGC GCAAGGCGCG GCGCTACCAA GCCGAAAGGC GCGCTTCGCC CTGCGCGCGA CCGAGCGAAC GCACGGAATG CGCGTCCTCC TGATCAACTC CAGCCCCACC GCGTTCGTCC TCGGCCTCCC GCGCCTGACC GCGCTCTCCC TCCTGCGCGC CACGGGCCTG CTCCTGCTCC GCCGCCTCCC GGACGCCCGA GCCGAACTGA CCGCCCTCCA CCACCTGCTC ACCGGTCGCG CGGCTCTGCG CGCAGCCCGA GCCGCCCGCC CCCACCGGGC GGCCCTCCCC GGCCTCCTGA CCAGCCGGAC CACCCGCCTC CGCAACACCG CCCGAGCCAT CGCGACCCAC CTGGTCCGCC GCAGGATCGA GGCCGACGCA GCCCTGGGCA AACTCCCCGC CCCGCCCACC ACCGCCCCGC CCACCACCGC CCCGCCCCAC GCTCCCGAAT CCGAGGACCT CCCCAGACGC GTGGGCCCGG ACGCACTCCC CGCAGGCGCC CTGCCCCGCC GCAGACCGGT CCGCACCACC GGCGGCCTGC GCAAACCCGC CACAGCAGTC CTCCTGCCCG CCCCGAACCC CACCTCCCTC CCAGTCCCGC CCGCCGCCTC CACTCCGCCC CCAGCGTCGG AAGCAACCAC CCCCACCCCG CTCCGCCCGT CCCCGGTGCC GAGGGGCACC CCTCTCCCAC CCCCGTTGCC CCGCGCGGTG TTCGTCGAGG TCGACCGGGC GACCGTGCTG CGCTCGGTCC TGCTCGGCCC GCCGCTCCTC CTGGCGCTGG GCCTGGTCCT GTTCGCGCTG GTCGCCAACT CCGGCCGCCT GGGCCTCGAC CTCGCGGGTG GCCGTCTCCT GCCCGTCCCC GCGCTGGCCG ACCTGTGGTC CGCGTACCTG TCGCCGTGGC ACCCGGTGTC CGGCGGCACC ACCGCGCCCG CCCCCGCCGC TCTGGCCGTC CTGGGCACGG CCGGAGCCCT CCTGGGCGGT CCGGCGGCGG CCACCGCGCT GCTCCTCCTC GGCGACGCCC CGCTCGCCGG TCTGGCCGCC TACGCCGCGA CCAGGCGCGC CCCCGTTCCC CGCCCGGTCA GAGCCCTCCT GGCGGCCTGC TACGCCCTGC TACCGGCCTC CACCGCAGCA GTGGCCCAAG GTCGCCTGGA CGTGGTGGTC GTGCACGTCC TGCTACCACC CGTGCTGGCC GGTGTGGCCG CCGTCCTGCG CGGTGGCACC GGTCCGGCCT GGTTGCCGGT CGCGTCCGGG ACGGCGCTGG GCCTCGCCGC GCTCGGCGCG TTCTCGCCGC TGGTCCACGC GCTGGTGGCG CTGGCCGCGC TGATCGGCTT CGTGGCCGTG CCCGCCCTGA TCGGCGACGG CAGGAGGCGG ATGGCCGGTC TGTTCGCCAT CGTCCTGCTC CCCATGGCGC TGCTGCTCCC GTGGCCCGCC GTGGTCGTGG AGAACCCGGT GGTGCTGCTG CACGGCGTAG GCGCTCACCA ACCCACCCCA CCCGTCTCGG TGACGGATCT GCTCGCGCTG ACCCCAGGCG GTGACGGCGC GCTCCCGTGG GCGGGCGCGC TTCTCCTGCC CGCCGCCCTG ATCGCCGCGC TGCTGCGCCC AACGCGCGCG ATGCTGCCGG GCGCGGCGGC GGTCGTGCTG GCAGGGTTCG CCGCGGTGGC CCTGATCGCG TTCCCGGTCA CCCCGATGGG TGGCGGCGAC GCCCACACGG GCTGGACCGG CGCCCCCCTG GTCCTGGCGG GCTGGGGTCT GGTCCACGTG CTGCTGGCCG CCTGCCACCA CCCCGCCACC GCGCGACCGG GCCAGGTCGC GCCGCCCGCA GCTCAAGCCG GGCCGCCGCA CGCTCCCCGC GCCGGATCGC CCCGCGTTCC CCGCGCCGAA CCGCTGCGCG TCGCCCGCGC CGAACCGCTG CGCGTCGCCC GCGCTGAACC GCTGCGCGTC GCCCGCGCTG AACCGCTGCG CGTCGCCCGC GCTGAACCGC TGCGCGTCGC CCGCGCTGAA CCGCTGCGCG TCGCCCGCGC TGAACCGCCG CGCGTTCCCC AAGCCGGGCT GCCCCGCGTT CCCCGTGCCA AGCCGCCGCA CGTCCCCCGC GCCGAGTTGC CGAAGCTGCT CCCCGCAGCC GCGCTGATCG TCCTGCTCCT GGTCCTGGCC CCGGCCGGAA TCCTCGGTCT GCGCGACGGC CCGCTGCGTG CCGACCCCGT CCGCCTGCCG TCCACCCTGG CCGTCGAGCT GCCCGCCACG AACCGCTCGG TGCTGGTCCT GGGCGAACCG ACCAGGCAGG TCGCGGGCAG GCTCCCGGCG TTCGGCGACG ACGACACCCC GCCGACCCCG TCCAGCCCGG TCCGCCTGGA GCGCTGGACC CGCGACCTGA CCGGCGGCGA CCAGCGGCGC ACCCGGACCG CGCTCGCGCA GGCGGCGGCG TCCGGCGTGT CGTTCGTGGT GCCGCGCGAC CGCGCCGAGG CCGACCGGAT GCGCGCGGCG GCGGGCGACC TGCTCACCAC CACCCAACCG CTCTCGGACG GCCGACCGGT GCTGCGGGTG CTGCTCACCG GCGGCACCGC CGTCCTGCTG TCCCCGGAAC TGGCCAGAAC CGCCCGAACC GGCGGCGACC CACCCGCCGA CCAGGGCGCA CCCGGCGTCG TGCCGGTGGC GGCCGACCTG CCCAACGCGG GCGCACGGGT CTCGGACGGC CCGGCAGGGC GCGTGCTCGT CCTGGCGGCA GAGGAGGAAC CGGGCTGGCG GGCGACCGCG GACGGCAGAC CGGTCCCGGT GCTGCGCGCG TGGGGCCACC TGGTGGCCGT GCCGGTGCCC GCGCAGGCGG CGGACGTGCG CGTGGAGGCG CCGACCCTGC TCCGCGAACT GCTCCTGCTG ACCCAGGCCG CCGCCGTCCT GGTCACGCTG CTCACCGCGC TCCCCACCCG CCGCCGCTGA
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Protein sequence | MTHGTPAPRT APVLAVLVCH DGERWLGEAL AALHAQRPAP RHVLAVDTGS RDGTAALLAA ASAGAGGVPS SGVPSGVVPA GAAPSSAPPA SAPPASTTAL VGAAVVKAAA SGGAGMLRAG PLRAGLLSGV LTLPRSTGFA EAVHAAVAHA EERWGDPGAW VWVLHDDSAP EPGCLAALLA TAEIAPSSAV LGPLVVDWAD PRVVVEAGLS TDASGQRQTG VGRGEPVGAF ERTSEALAVG SAGSLVRRSA WTGLGGYDRA FGLVGEDVDL GWRANLAGHS VLLAPAARLR HARALTTGER LLEPDGPGVG DRPRPPGTPL AGAGAGAQGA ALPSRKARFA LRATERTHGM RVLLINSSPT AFVLGLPRLT ALSLLRATGL LLLRRLPDAR AELTALHHLL TGRAALRAAR AARPHRAALP GLLTSRTTRL RNTARAIATH LVRRRIEADA ALGKLPAPPT TAPPTTAPPH APESEDLPRR VGPDALPAGA LPRRRPVRTT GGLRKPATAV LLPAPNPTSL PVPPAASTPP PASEATTPTP LRPSPVPRGT PLPPPLPRAV FVEVDRATVL RSVLLGPPLL LALGLVLFAL VANSGRLGLD LAGGRLLPVP ALADLWSAYL SPWHPVSGGT TAPAPAALAV LGTAGALLGG PAAATALLLL GDAPLAGLAA YAATRRAPVP RPVRALLAAC YALLPASTAA VAQGRLDVVV VHVLLPPVLA GVAAVLRGGT GPAWLPVASG TALGLAALGA FSPLVHALVA LAALIGFVAV PALIGDGRRR MAGLFAIVLL PMALLLPWPA VVVENPVVLL HGVGAHQPTP PVSVTDLLAL TPGGDGALPW AGALLLPAAL IAALLRPTRA MLPGAAAVVL AGFAAVALIA FPVTPMGGGD AHTGWTGAPL VLAGWGLVHV LLAACHHPAT ARPGQVAPPA AQAGPPHAPR AGSPRVPRAE PLRVARAEPL RVARAEPLRV ARAEPLRVAR AEPLRVARAE PLRVARAEPP RVPQAGLPRV PRAKPPHVPR AELPKLLPAA ALIVLLLVLA PAGILGLRDG PLRADPVRLP STLAVELPAT NRSVLVLGEP TRQVAGRLPA FGDDDTPPTP SSPVRLERWT RDLTGGDQRR TRTALAQAAA SGVSFVVPRD RAEADRMRAA AGDLLTTTQP LSDGRPVLRV LLTGGTAVLL SPELARTART GGDPPADQGA PGVVPVAADL PNAGARVSDG PAGRVLVLAA EEEPGWRATA DGRPVPVLRA WGHLVAVPVP AQAADVRVEA PTLLRELLLL TQAAAVLVTL LTALPTRRR
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