| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5960 |
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| Symbol | |
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| ID | 8330167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7006648 |
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| End bp | 7007328 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946391 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003103614 |
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| Protein GI | 256379954 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.891848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAAGG TGCTGGTGGT CGACGACGAG CCGCAGATCG TCCGGGCGCT CCGGATAAAC
CTGTCCGCCC GCGGCTACCA GGTGCTCACC GCCCACGACG GCGCCGCCGC GCTCAGGGCC
GCCGCCGAGG GCAAGCCGGA CGTGGTGGTG CTCGACCTCG GGCTGCCCGA CGTCGACGGG
ACCGAGGTGA TCGCCGGGCT GCGCGGCTGG ACGACCGTGC CGATCATCGT GCTCTCCGCG
CGCGCCGACT CGACCGACAA GGTCGAGGCG CTCGACGCGG GGGCCGACGA CTACGTGACC
AAGCCGTTCG GCATGGACGA GCTGCTGGCC AGGCTGCGCG CGGCCGTCCG CCGCTCCGCG
GCGCCCGCCG ACGCCGGTGA GGCGGTGGTG CGGACGGGGG CGTTCACGGT GGACCTGGTC
GCGAAGAAGG TGCACCGGGA GGACGCCGAA GTGCACCTGA CGCCGACCGA GTGGGGGCTG
CTGGAGGTGC TGGTGCGCAA TCCGGGCAAG CTCGTCGCGC AGCGGCAGCT GCTGCAGGAG
GTGTGGGGGC CCGCGTACGC CAAGGAGACC CACTACCTGC GGGTCTACCT GGCGCAGCTG
CGGCGCAAGC TCGAACCCGA GCCGTCCAGG CCCCGGCACC TGGTGACCGA ACCGGGGATG
GGGTACCGGT TCGAGCCCTG A
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| Protein sequence | MTKVLVVDDE PQIVRALRIN LSARGYQVLT AHDGAAALRA AAEGKPDVVV LDLGLPDVDG
TEVIAGLRGW TTVPIIVLSA RADSTDKVEA LDAGADDYVT KPFGMDELLA RLRAAVRRSA
APADAGEAVV RTGAFTVDLV AKKVHREDAE VHLTPTEWGL LEVLVRNPGK LVAQRQLLQE
VWGPAYAKET HYLRVYLAQL RRKLEPEPSR PRHLVTEPGM GYRFEP
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