| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5953 |
|---|
| Symbol | |
|---|
| ID | 8330160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7001349 |
|---|
| End bp | 7002161 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644946384 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_003103607 |
|---|
| Protein GI | 256379947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGCT TCCGCAGCAC GGACCTGGGC GTCTACCTGC TCGGCTCGCT CGACCCGGTC
GAGCGCGGCG CGTTCGAGCG GCACCTGCGC GCCTGCCCGC CGTGCAGGCG GGAGCTGCTG
CGCCTCGCCC CGCTCCCCGG GCTGCTCGGC CAGGTCACGC TGCTCGACCT GGAGCAGCCG
TTCACCGACC CCGAGCCCTC GCCCGAGCTG GCCCCGCTGC CCGAGCTGCC GCCGCAACCG
CCGCCCCCGG TGCCCAGGAG CGCCCGGATC TCGGCCAGGA CCACCCTGCC GCTGGCCACC
CCGCTGCCCC CGGCGCCGGA CGGCTGGCTC GTCGGCTCGC GCGTCAAGCG GGGGAACCGG
GCGCGGGACG CGGGGCGGGG TCCCGTGCGC CGCGCGGCGC GGTGGCCGCT TCCGGCCGCC
GCCGCGGTGC TGTTCGGGGT GCTGCTGGCG GGCGCGCTGC TGGTCACCCC CGGCTGGCTC
GCCCACGAGG ACCCCGGACC GGTCCCCGTC GCGTCGAGCA CGGCGGTGAC CTGGGCCGGG
ACCGACGCGG GCACCGGCGT CGCGGCCCGC GCCGAGCTGG TCGGCCGGGA CTGGGGCACC
GAGCTGCTGC TCACCCTCGA CGGCGCGCCG GACGGGGCGC GCTGCCGCCT CGTGGTGCAC
GGGACGTCCG GGCGCACCGA GGTCGCCGGC TGGTGGGGCA GCGGCCCCGC GCGGCACGAG
CGCGTGCCGG GCGCCACCTC GTTCGCGCTG GCCGACGTCG AGCGGGTCGA CGTCGTGGTC
GACATGCGGG TGCTCGTCTC CGTGCGCCCC TGA
|
|---|
| Protein sequence | MTCFRSTDLG VYLLGSLDPV ERGAFERHLR ACPPCRRELL RLAPLPGLLG QVTLLDLEQP
FTDPEPSPEL APLPELPPQP PPPVPRSARI SARTTLPLAT PLPPAPDGWL VGSRVKRGNR
ARDAGRGPVR RAARWPLPAA AAVLFGVLLA GALLVTPGWL AHEDPGPVPV ASSTAVTWAG
TDAGTGVAAR AELVGRDWGT ELLLTLDGAP DGARCRLVVH GTSGRTEVAG WWGSGPARHE
RVPGATSFAL ADVERVDVVV DMRVLVSVRP
|
|---|
| |