Gene Amir_5938 details

Gene Information

• Locus tag: Amir_5938
• ID: 8330145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6984153
• End bp: 6984647
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644946369
• Product: OHCU decarboxylase
• Protein accession: YP_003103592
• Protein GI: 256379932
• COG category: [S] Function unknown
• COG ID: [COG3195] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03180] OHCU decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGTG CGGACAGCGG CGGGATCGGG TGGTTCGACG CGGGTGAGCC CTCCCTGCTC 
CGGCCCTTGG TGCTCGACTG CCTCGCGGTG CCCCGGTGGG TGGACGGCGT GCTCGCCGCG 
CGGCCGTTCG GGGTGGTGGA GCGGCTGGTC GCCGCGGCCG ACGTGGTGCT GTCCGACGAC 
GAGGTCCTCG GCGCCATCGC GCACCACCCC CGCATCGGTG AGCGCGGGCG CGGAACCTCC 
GCCGCCTGGT CGGATCGGGA GCAGTCCGGG GTGGACGGCT CGCTCTCCGC GCAGCTCACC 
GAGGCCAACG CGCGCTACGA GGCCCGGTTC GGGCACGTCT TCCTCGTCTG CGCCACCGGG 
TTGAGCGGGG CGGACGTGCT CCGGGCCGTG GAAGCGCGCA TGGGGAACGA CCCCGCTCAC 
GAGCTCCGGG TCGTCAACCG CGAGCTGTGC CGGATCGCCG CCATCCGGCT GCGGAAGCTG 
GTGCACCGCG ACTGA 

 

Protein sequence

MTGADSGGIG WFDAGEPSLL RPLVLDCLAV PRWVDGVLAA RPFGVVERLV AAADVVLSDD 
EVLGAIAHHP RIGERGRGTS AAWSDREQSG VDGSLSAQLT EANARYEARF GHVFLVCATG 
LSGADVLRAV EARMGNDPAH ELRVVNRELC RIAAIRLRKL VHRD