Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5620 |
Symbol | |
ID | 8329826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6635632 |
End bp | 6637245 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644946058 |
Product | Terminase |
Protein accession | YP_003103282 |
Protein GI | 256379622 |
COG category | [R] General function prediction only |
COG ID | [COG4626] Phage terminase-like protein, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGGC TGATCGTCCC GCCCTACGAC GAGGAGCCGT GGCCGACGCT CGGACCGCAG GTCGTAGACC TGATCGAGGC CGCGGCGACG TTCGGGCCGG GCGACCTGCG CGGCGAGCCC GCGGTGATCG ACGACGAGAA GCGAGCGTTG ATCTACCGGG CGTACGAGGT CTACCCGAAG GGGCACCCGC GCGCGGGGAA GCGTCGGTTC AAGCGGGTCG CGGTCTCGAC GCGCAAGGGC ACGGCGAAGA CCGAGCTGGC CGCGTGGATC GGGTTCGCTG AGCTGCACCC CGACGGGCCG GTGAGGTGCG ACGGGTTCGA CGCGCACGGT GAGCCGGTCG GGCGCCCGGT GCGGGACCCG TACATCCCGA TGGTCGCCTA CACCGAGGAG CAGACCGAGG AGCTGGCGTA CGCGGCGCTG CTGGTGATGT GCCAGGAGGG CGCGGACGGC GACCTGTTCG ACGCGGGTCT GGAGCGGATC ACCCGGATCA ACGGCGACGG CAAGGCCGTC GCGCTGGCCG GGTCACCGAA CGCTCGCGAC GGCGCACGCA CGAGCTTCCA GCACTTCGAC GAGCCGCACC GGATGACCAG TCCGCGGCTG CTGGGCGCGC ACCAGACGAT GCTGCAGAAC ATCCCGAAGC GGCCGATGGC CGACCCGTGG TCGTTGTCCA CCACCACCGC CGGCGTGCCC GGCGAGGGCT CGGTGGCGGA GGTGGAGAAG GGGTACGCGG AGAAGATCGC CGAGGGGCGC ACGAAGGACG CCACGTTCTT CTTCTTCCAC CGCGAGGCCT CGCCCTCCCA CGACCTGGAC ACCGAGGGCG GCCTGCGAGC GGCGATCGTG GAGGCCTCCG GCCCGGCGGT CGCGGCCTGG TCCGACATCG ACTCGATCAT GTCGCTGTTC CACCAGGACG ACACCGACCG CAGTTACTTC GAGCGGGTGT GGCTGAACAG GTGGGTGGCG TCGAGCAGGC AGGCGTTCGA CCCGGTGCGC TGGGCAGACC TCGAGATCAG CGAGGTCATC CCGCACGGGG AGCCGATCAC GCTGGGCTTC GACGGCGCCC GCTGGCGAGA CGCCTGCGGG CTGATGGCCA CGCACATCGA GACCGGCTTC CAGTGGCCGC TCGCCTGGTG GGAAAACGTC GACGGGGACG AGGACTGGGA AGTCTCCGAC GAGCAGGTCG ACGGCGCGTT CGCCGAGGCG ATGGAGCTCT ACCAGGTGCG GATGGCGTAC AACGACCCGC CGCGGTTCGA GGCGAACGTC GCGCGGTGGG CAGGCCGGTG GGGTGAAAAG CGGGTGCTGG AGTGGTACAC CAACCGCCCG GTGCAGATCG GCAAGGCCAT GAGGGCGTTC GCAACCGCCC AACGGACCGG CGCGCTCACC CACGACGGGA ACGAGGCGTA CGCCCGGCAC ATCGCCAACG CGCGCAAGGG CGACCTGCGC GTGCGCGACG ACGACGAGAC CCCGCTATGG ACGATCTACA AGGAGCGTCC GGACAGCGTG AAGTTCATCG ACTTGGCCAT GGCGGGCTGC CTGTCCTGGC AGGCGCGACT GGATGTGCTG GCCAAGGGCT CCTGGGAGAA GAAGCCTAAG AGCACGATGA TCATCCTGCG GTGA
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Protein sequence | MTGLIVPPYD EEPWPTLGPQ VVDLIEAAAT FGPGDLRGEP AVIDDEKRAL IYRAYEVYPK GHPRAGKRRF KRVAVSTRKG TAKTELAAWI GFAELHPDGP VRCDGFDAHG EPVGRPVRDP YIPMVAYTEE QTEELAYAAL LVMCQEGADG DLFDAGLERI TRINGDGKAV ALAGSPNARD GARTSFQHFD EPHRMTSPRL LGAHQTMLQN IPKRPMADPW SLSTTTAGVP GEGSVAEVEK GYAEKIAEGR TKDATFFFFH REASPSHDLD TEGGLRAAIV EASGPAVAAW SDIDSIMSLF HQDDTDRSYF ERVWLNRWVA SSRQAFDPVR WADLEISEVI PHGEPITLGF DGARWRDACG LMATHIETGF QWPLAWWENV DGDEDWEVSD EQVDGAFAEA MELYQVRMAY NDPPRFEANV ARWAGRWGEK RVLEWYTNRP VQIGKAMRAF ATAQRTGALT HDGNEAYARH IANARKGDLR VRDDDETPLW TIYKERPDSV KFIDLAMAGC LSWQARLDVL AKGSWEKKPK STMIILR
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