Gene Amir_5380 details

Gene Information

• Locus tag: Amir_5380
• ID: 8329582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6394794
• End bp: 6395333
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644945817
• Product: phage tail protein
• Protein accession: YP_003103045
• Protein GI: 256379385
• TIGRFAM ID: [TIGR02242] phage tail protein domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.885071
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTCG GCGCGCTCAC CCTGCCCAGC CCGCACCCGC TGGGCGAGCG GCTCCCCGCC 
GTCTACACCG AGGACGGCTT CACCCAGCGG TTCACCGAGG CGCTCGACGA GGTGCTCGCC 
CCGGTGTTCA CCGCGCTGGA CGGCTTCGCC GCCTACCTGG ACCCGCGCAC CGCGCCCGAG 
GACTTCCTGG AGCTGCTGGC GCACTGGGTC GCGCTGGACG TCGGCGAGGG GTGGACGCCC 
GCGCAGCGCC GGGACCTGGT CGCGTCGGCG GTGCGGCTGC ACCGCCGGCG CGGCACCCGG 
CGCGGCCTGG TCGAGCACGT CCGGCTGCTC TCCGGCGGTG AGGTGGAGGT CGTCGACAGC 
GGCGCCTGCA CCTCCACCGG CCAACCCGGC CAACCGCTGC CCGAGACCGG ACCGCCGTCG 
GTCCGCGTGG TGGTGCGGGT GGCCGATCCC GAATCCGTTG ACCGGACCCG GCTGGCCTCG 
GCCGTGGCGG GGGCGGTTCC CGCGCACGTC GCGGTCGAGG TGGAAGTGGT GGGGCAGTGA 

 

Protein sequence

MRLGALTLPS PHPLGERLPA VYTEDGFTQR FTEALDEVLA PVFTALDGFA AYLDPRTAPE 
DFLELLAHWV ALDVGEGWTP AQRRDLVASA VRLHRRRGTR RGLVEHVRLL SGGEVEVVDS 
GACTSTGQPG QPLPETGPPS VRVVVRVADP ESVDRTRLAS AVAGAVPAHV AVEVEVVGQ