| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5345 |
|---|
| Symbol | |
|---|
| ID | 8329547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 6359071 |
|---|
| End bp | 6360117 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644945783 |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_003103011 |
|---|
| Protein GI | 256379351 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.125368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACG GCTGGCTGCT GGTCATGACG TTCGTCCTGC TCGGGTGCAA CGCGTTCTTC
GTCGGCGCGG AGTTCGCGCT GATCAGCGCC CGTCGGGACC GGTTGGAGAG CATGGTGGAG
CGCGGGGTGG CCCGCGCCGC GCTGGTGATC AAGGCCAGTC GCGAGGTGTC GCTGATGCTG
GCGGGCGCGC AGCTGGGCAT CACGATCTGC TCGCTGCTGC TGGGCCGCCT CGGCGAGCCC
GCGGTGGCGC ACCTGATCGA GGGCGCGCTG CACCCGCTGT CGATCCCGCC GGTGGTGCTG
CACGGGGTGT CGTTCGCGAT CGCCATGATG CTGGTGGTGG TGGCGCACAT CCTGCTGGGC
GAGATGGTGC CGAAGAACCT GGCTATCGCG AACCCGGAGC GGCTGGCGAT CTGGCTGGTG
CCGGTGCACG TGGCGTTCAT CAAGGTCGTC CGGCCGTTCA TCAGCCTGTT CAACATCGCG
GCCAACGGGG TGCTGAGGTT GATGAAGGTG GAGCCGAAGG ACGAGCTGGA GTCGGCGTAC
ACCTCGGACG AGCTGTCGCT GCTGATCTCG CAGTCGCGGC AGGAGGGGTT GCTGGAGGAC
TCCGAGCACC GGAGGTTGGC GCAGACGCTG TCGTCGGCGG AGCGGACGGT GGCGGACGTG
CTGGTGCCGC TGGACCGGGT GACGTCGCTG TCGGCGCGGC CGACGATGGC CGAGATCGAG
TCGGCGGTGG CGGAGACCGG GTTCTCCCGG TTCCCGGTGC GGTCGACCGA TGACCTGGTC
GGGTACCTGC ACGTGAAGGA CGTGCTGGAC CTGGCCGAGG CCGGTGAGGG CGCGACTGTT
CCTTCGGGGC GGGTGCGCGG GTTGCCGGAG GTGCCGGTGG GCGCGCGGTT GGACGAGGCG
CTGGCGTCGC TGCGGCGCTC GCAGAGCCAC CTGGCGAAGG CCGTCGGGCC GGACGGCGCA
ACCCGTGGCG TCGTGGCCCT GGAGGACCTG GTGGAGGAGT ACGTGGGAAC CGTCCGCGAC
GGGACGCACG TGCGCCGCGA GGTGTGA
|
|---|
| Protein sequence | MSDGWLLVMT FVLLGCNAFF VGAEFALISA RRDRLESMVE RGVARAALVI KASREVSLML
AGAQLGITIC SLLLGRLGEP AVAHLIEGAL HPLSIPPVVL HGVSFAIAMM LVVVAHILLG
EMVPKNLAIA NPERLAIWLV PVHVAFIKVV RPFISLFNIA ANGVLRLMKV EPKDELESAY
TSDELSLLIS QSRQEGLLED SEHRRLAQTL SSAERTVADV LVPLDRVTSL SARPTMAEIE
SAVAETGFSR FPVRSTDDLV GYLHVKDVLD LAEAGEGATV PSGRVRGLPE VPVGARLDEA
LASLRRSQSH LAKAVGPDGA TRGVVALEDL VEEYVGTVRD GTHVRREV
|
|---|
| |