Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5343 |
Symbol | |
ID | 8329545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6356553 |
End bp | 6357593 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945781 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003103009 |
Protein GI | 256379349 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.629268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGTTGC GGCAGGTCAC GCTGGCCGAG GTGGCCAGGC ACGCGGGGGT CTCGCTGGCG ACCGCCTCGC GCGTGCTCAA CGGCAGCACC CGGCAGGTCA GCGACGAGCT CAGGGACAAG GTCGTCGGCA GCGCCGAGCA GCTCGGCTAC CTGCCGAACG CCGCCGCGCA GGCGCTCGCC CGCAACAGCA GCGTGCTGGT GGGCCTGGTG GTGCACGACA TCGCCGACCC CTACTTCTCC AGCATCGCGG CCGGTGTGAC GAGGGTCGCC GAGGAAGCTG GCATGGTGCT CGTGCTGGGC ACCACGAACC GCGACCCGGC GCGCGAGGTC GAGCTGGTCA ACACGCTCCG CGCGCACCGC GCCCGCGCCC TGGTGATCGC GGGCAGCCGC ACCACCGACC GGGCGTCGAC GGCGCGCCTC GCCGAGGAGG TCGCCGCGTT CACGGCGCAG GGCGGCCGGG TGGCGTGCAT CTCCCAGGCC AAGCTGGGCG CCGACACGGT CGTGCCCGGC AACCGGGCGG GCGCCCGCGC GCTCGCCAAG GAGCTGGCCG CGCTCGGGCA CCGGAGGTTC GCCGTGCTCT CCGGCCCGAA CGACCTGGTC GTGGCCCGCG ACCGCCTCTC CGGCTTCCGC CAGGGCCTGG CCGACGCGGG CCTGGAGCTG CCCGGCCAGG CGGTCTTCCC CAGCGAGTTC ACCAGGGACG GCGGGCACCG CGCGGTGACC GACCTGCTGG CCGCCAAGAC CGGCGCGACC TGCGTGTTCG CCGTCAACGA CGTCATGGCG ACCGGGGCGG TCGCGGCACT GCGCGAGCGC GGGCTGGACG TGCCCGGCGA CGTGTCCGTC GCGGGCTTCG ACGACATCCC GACGCTGCGC GACCTCCAGC CCCCGCTGAG CACCGTGCGG CTGCCGCTGG AGCAGATGGG CGAGCGGGCC GCGCGCTTGG TCCTGGACGA GGTCGGGGGC CCGCCACGCA CGGTGCGCGT CGCAGGTGAG GTGGTGCTCC GGGCCAGCAC GGCTCGACCT GCGGGAACCG GACTGCGCTG A
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Protein sequence | MALRQVTLAE VARHAGVSLA TASRVLNGST RQVSDELRDK VVGSAEQLGY LPNAAAQALA RNSSVLVGLV VHDIADPYFS SIAAGVTRVA EEAGMVLVLG TTNRDPAREV ELVNTLRAHR ARALVIAGSR TTDRASTARL AEEVAAFTAQ GGRVACISQA KLGADTVVPG NRAGARALAK ELAALGHRRF AVLSGPNDLV VARDRLSGFR QGLADAGLEL PGQAVFPSEF TRDGGHRAVT DLLAAKTGAT CVFAVNDVMA TGAVAALRER GLDVPGDVSV AGFDDIPTLR DLQPPLSTVR LPLEQMGERA ARLVLDEVGG PPRTVRVAGE VVLRASTARP AGTGLR
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