Gene Amir_5252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5252 
Symbol 
ID8329454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6249782 
End bp6250222 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content72% 
IMG OID644945691 
Product3-dehydroquinate dehydratase 
Protein accessionYP_003102919 
Protein GI256379259 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.667512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCTCC TCGTCCTCAA CGGCCCGAAC CTCGGCAGGC TCGGCACCCG CGAACCCGCC 
GTCTACGGCC GCACCACCCA CGCCGACCTG GTCGCGCTCT GCGAGTCCAC CGGCCGCGAG 
CTGGGCGCCG AGGTCGAGGT CAGGCAGACC GACCACGAGG GCGAGATGCT CGGCTGGCTG 
CACGAGGCCG CCGACGAGTC CTGGCCGGTG GTGCTCAACC CGGCGGCCTG GACCCACTAC 
TCGGTGGCCG TCCGCGACGC CTGCGCCCAG CTCACCGCGC CGCTGATCGA GGTGCACATC 
TCGAACGTGC ACAAGCGCGA GGAGTTCCGC TCGCACAGCT ACATCTCGCC GGTCGCCGAG 
GGCGTCATCG CGGGCCTGGG CGTCCAGGGC TACGCGCTCG CCCTGCGCTA CCTGGTCGAC 
AAGGCCACCA CCAGCGCCTG A
 
Protein sequence
MRLLVLNGPN LGRLGTREPA VYGRTTHADL VALCESTGRE LGAEVEVRQT DHEGEMLGWL 
HEAADESWPV VLNPAAWTHY SVAVRDACAQ LTAPLIEVHI SNVHKREEFR SHSYISPVAE 
GVIAGLGVQG YALALRYLVD KATTSA