| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5134 |
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| Symbol | |
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| ID | 8329332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6114785 |
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| End bp | 6116413 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945569 |
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| Product | ABC transporter related |
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| Protein accession | YP_003102801 |
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| Protein GI | 256379141 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.707972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACCG CAACCGATCT CGAGTTGCGC GCGGGTTCGC GCATCCTGCT GTCCGACGCG
ACCCTGCGCG TCCAGCCCGG CGACCGGATC GGCCTCGTCG GTCGCAACGG CGCGGGCAAG
ACCACGACCC TGCGGGTCCT CGCGGGCGAG GGCCAGCCGT ACGCGGGGGA GGTGCGGCGC
ACCGGCGACC TCGGCTACCT GCCGCAGGAC CCCCGCGAGG GCGACCTGTC CGTCATCGCG
AAGGACCGGG TGCTGTCCGC GCGCGGCCTG GACCAGCTCG TGCGCGACAT GGAGAAGACG
CAGACCGCCA TGGCGGAGCT GGCCGACGAG GCCGAGCAGG AGGCCGCCGT GCGCCGCTAC
GGGCGGCTGG AGGAGCGGTT CTCCGCGCTC GGCGGGTACG CCGCCGAGAG CGAGGCCGCC
CGGATCTGCG CGAACCTGGG CCTCGCGGAC CGGGTGCTCG CGCAGCCGCT GCGCACCCTG
TCGGGCGGTC AGCGCCGCCG CGTCGAGCTG GCCCGCATCC TGTTCGCCGC CTCCGAGGCG
GGCGTGGGCG CCAAGTCGAG CACGATCCTG CTGATCGACG AGCCCACCAA CCACCTCGAC
GCCGACTCGA TCGCCTGGCT GCGCGGGTTC CTCAAGTCGC ACGACGGCGG CCTCGTGGTG
ATCAGCCACG ACGTGGAGCT GCTCGACGAC GTGGTGAACA AGGTGTGGTT CCTCGACGCC
ACGCGTGGCG AGGTCGACAC CTACAACATG GGCTGGAAGA AGTACCTGGA GGCGCGCTCG
GCCGACGAGA AGCGCCGCCG CCGCGAGCGG GCCAACGCGG AGAAGAAGGC CGGGGCGCTC
ATGGCCCAGG CCGACAAGAT GCGCGCCAAG GCCACCAAGG CCGTCGCCGC CCAGAACATG
GCCCGCCGCG CCGAGAAGCT GCTGTCCGGG CTTGAGGAGA CCAGGCAGGC CGACAAGGTC
GCCAAGATCC GCTTCCCGCA GCCCGCCCAG TGCGGGCGCA CCCCGCTGAC CGCCGAGGGC
CTGAGCAAGA CCTACGGGTC GCTGGAGGTG TTCACCGGCG TCGACCTGGC GATCGACCGG
GGCTCGCGGG TGGTCATCCT CGGCCTGAAC GGCGCGGGCA AGACCACGCT GCTGCGCCTG
ATCGGCAGCA TGGAGACCCC CGACAGCGGC GAGGTCGTGC CCGGCCACGG GCTCAAGCTC
GGCTACTTCG CGCAGGAGCA CGAGACGCTC GACCACGACG CGTCGGTGTG GGCGAACATC
CGGCACGCCG CGCCGGACGT GCCGGAGCAG CAGCTGCGCT CGCTGCTGGG CACGTTCCTG
TTCAGCGGCG AGCAGCTCGA CCAGCCGGCG GGCACCCTGT CGGGCGGCGA GAAGACCCGG
CTGGCGCTGG CGGGCCTGGT CTCCAGCGCG GCCAACGTGC TGCTGCTCGA CGAGCCCACC
AACAACCTCG ACCCGGCCAG CCGCGAGCAG GTGCTCGACG CGCTGCGCCG CTACGAGGGG
GCCGTCGTGC TGGTCACGCA CGACCCCGGA GCGGTCGAGG CCCTGGAGCC CGAGCGGGTG
ATCCTGTTGC CGGACGGGAC CGAGGACCAC TGGTCCGCGG AGTACCTGGA ACTCGTGCAA
TTGGCCTGA
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| Protein sequence | MITATDLELR AGSRILLSDA TLRVQPGDRI GLVGRNGAGK TTTLRVLAGE GQPYAGEVRR
TGDLGYLPQD PREGDLSVIA KDRVLSARGL DQLVRDMEKT QTAMAELADE AEQEAAVRRY
GRLEERFSAL GGYAAESEAA RICANLGLAD RVLAQPLRTL SGGQRRRVEL ARILFAASEA
GVGAKSSTIL LIDEPTNHLD ADSIAWLRGF LKSHDGGLVV ISHDVELLDD VVNKVWFLDA
TRGEVDTYNM GWKKYLEARS ADEKRRRRER ANAEKKAGAL MAQADKMRAK ATKAVAAQNM
ARRAEKLLSG LEETRQADKV AKIRFPQPAQ CGRTPLTAEG LSKTYGSLEV FTGVDLAIDR
GSRVVILGLN GAGKTTLLRL IGSMETPDSG EVVPGHGLKL GYFAQEHETL DHDASVWANI
RHAAPDVPEQ QLRSLLGTFL FSGEQLDQPA GTLSGGEKTR LALAGLVSSA ANVLLLDEPT
NNLDPASREQ VLDALRRYEG AVVLVTHDPG AVEALEPERV ILLPDGTEDH WSAEYLELVQ
LA
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