Gene Amir_5069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5069 
Symbol 
ID8329267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6045677 
End bp6046321 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content77% 
IMG OID644945505 
Productbeta-lactamase domain protein 
Protein accessionYP_003102737 
Protein GI256379077 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTAC CCGGACTGCT TCGGTTGCGC CTGGACGGCG TGGCGCAGTG CTACCTCGTC 
CGCGACGACG AGGGCGTGAC CGTGATCGAC ACCGGGACCG CGGGGCACGC CGGGCCGATC 
GCGCGCTGGG CCGCCGAGTT CGGCCCGGTC CGGCGGATCG TGCTCACGCA CCACCACGCC 
GACCACGTCG GTTCCGCCGC CGCCCTGCGC GCGCTCACCG GAGCCCCGGT GCTCGCGCAC 
GCCGCCGACG CGCCCGTGGT GCGCGGCGAG GCCGAACCGC CGCCGCCGGT GCTGACCGAC 
GAGGACCGGC CGCTGTGGGA GGCGATCACG CCCACCGTGC CGCCCGCGCC GCCGTGCCCG 
GTGGACGGGG AGGTCGCGGA CGGGGACGTG CTGCCGTTCG GCGGCGGCGC GCGGGTGCTG 
TCGATCCCCG GCCACACGGA CGGCAGCATC GCGCTGCACC TGCCCGCGCT GGGCGTGCTG 
TTCACCGGGG ACGCGCTGGC GTCGGTCGGC GGCCCGCTGC GGCCCGGCGT GTTCAACACC 
GACCGGGCCA GGCTGGAGGA GTCCGTCCGC AGGCTGCTGG CCGTGGGCGC GGACCTGGTG 
TGCGTCGGGC ACGGCAAACC GGTCCGCACC GGCGCTCCGC GCTGA
 
Protein sequence
MELPGLLRLR LDGVAQCYLV RDDEGVTVID TGTAGHAGPI ARWAAEFGPV RRIVLTHHHA 
DHVGSAAALR ALTGAPVLAH AADAPVVRGE AEPPPPVLTD EDRPLWEAIT PTVPPAPPCP 
VDGEVADGDV LPFGGGARVL SIPGHTDGSI ALHLPALGVL FTGDALASVG GPLRPGVFNT 
DRARLEESVR RLLAVGADLV CVGHGKPVRT GAPR