Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5025 |
Symbol | |
ID | 8329223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5985832 |
End bp | 5987058 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945462 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003102694 |
Protein GI | 256379034 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGGA ACAGCGGAGT CACCGTCGTG GGCATCCCCG CGCGCGACGA GGAGCGGACC GTGCGCGGGG TGGCCGAGGC CGCCGACGCC GGGTTGCGCC TTGCCTTCCC CCACGGGGAC AACGCCGTCG TGCTCGCCGA CAACGGCAGC ACCGACGGCA CGGTGGCCCG GTTCGCCGGG ACGCCGCTGC GCGCGCGCAA GGTCGTGGCG CGCAGCGGGC GCGAGGGGAC CGGCAAGGGC ACCAACGTGC TCGCCGTGTT CGACCGGGCG CGCGAGCTGG GCGCGGACCG GCTGCTGCTG CTCGACGCGG ACGTGCGCTC GGCCGAACCG GGCTGGGTCG GCGCGCTGGC CGAGGCGGTG GACGGGGACG AGCCGGTGAT GGCGCTGCCC TGCTACCGGC GCGACCGGTA CGAGGCGAAC ACGACCAACC ACCTGGTGAG CCCGCTGCTG GCGGCCGTGT ACGGGGCGCA CGTGCAGCAG CCGATCGGCG GCGAGTTCGC GTTCAACCGG GCGTTCCTGG AGCGGGCGGC GACCTGGGAG CGGCCGGACA GCGCGCAGCT GTACGGGATC GACGTGTGGC TGACCGCGAA CGCGCTGCGG GAGGGGCTGC GGCTGGTGGA GGTCCCGCTG GGGCGCAAGC TGCACAACTC GCCGTTCCCG AAGATCCTGC GGCTGCCGCA GCAGGTGCTG GACTCGCTGT TCCACGTGGT GCTGGCGACC GACCGGGTGC GCGACGCCGC GCCGCGCGGG TCGGGGCTGC GGCAGGCGGT GGACGTGGCG GCGGTGCCGC AGGACCCGGC GGTGGTGGCG CGGGTGGCCG ACGCGGTGGG GCGGTACCTG GCGGCGCACC GGGGCGACGT GCTCGCGCTG TTCCCGGCGG CGCGCGGCCT GGTGGCGGCG CCGTGGGGGC TGCGGGTGGA CGCCGGGGTG TGGCCGGAGC TGCTGGCGGA CGCGGTGGTG GCGCTGTCGG AGGGCTGGTT CACGTCGGCG CGGGACCACC TGGTGGCGCT GTACGTGAAC CGGGTGATGA CGTTCTGGGA CGAGATCGAG GGGTTGGACG GGGCCGCCGT GGACGCGGTG CTGGACCGCC AGGCCGTGGA GACGGCGCGG GCGGTCGCGG GGCGCGGGGT GGAGCTGGGC GGCCGGGTGA CCGGGCCGGG GGCCTTCCAC GTCGGGCACT GGAGCGGGTT CAACGCCGAC GAGCCCGCGC GAGGGCTTGC GGTGTGA
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Protein sequence | MTRNSGVTVV GIPARDEERT VRGVAEAADA GLRLAFPHGD NAVVLADNGS TDGTVARFAG TPLRARKVVA RSGREGTGKG TNVLAVFDRA RELGADRLLL LDADVRSAEP GWVGALAEAV DGDEPVMALP CYRRDRYEAN TTNHLVSPLL AAVYGAHVQQ PIGGEFAFNR AFLERAATWE RPDSAQLYGI DVWLTANALR EGLRLVEVPL GRKLHNSPFP KILRLPQQVL DSLFHVVLAT DRVRDAAPRG SGLRQAVDVA AVPQDPAVVA RVADAVGRYL AAHRGDVLAL FPAARGLVAA PWGLRVDAGV WPELLADAVV ALSEGWFTSA RDHLVALYVN RVMTFWDEIE GLDGAAVDAV LDRQAVETAR AVAGRGVELG GRVTGPGAFH VGHWSGFNAD EPARGLAV
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