Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5017 |
Symbol | |
ID | 8329215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5976672 |
End bp | 5978081 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644945454 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003102686 |
Protein GI | 256379026 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.77659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGCGA TCGACCCCGC CCTGCCGCTC GACGAGATCG AGCGCACGCG CCAGAGCCTG GGCACCGCCG CCGCCCGCAA CCTGGCCACC ACGACCAAGT CCGCCCCGCA GATGCAGGCC ATCTCGGCCC GCTGGCTGCT GCGCGAGCTG CCCTGGGTGC AGACCCAGGC GGGCACGTAC CGGGTCAACC GCAGGCTCAC CTACGCCGTC GGCGACGGGC GGATCACCTT CACCAGCACC GGTTCCGACA TCCGCGTCAT CCCGCAGGAG CTGCGCGAGG TGCCCGCGCT GCGCGCCTTC GAGGACGACG ACGTGCTGAC CGCGCTCGCG AACCGGTTCG TGCAGCGCGA GTTCACCCCC GGCGACCTGC TGGTGCAGCG CGGCGACCGC GCCGAGGAGC TCTTCCTCGT CGCGCACGGC AAGGTCGACA AGATCGGCGA GGGCGAGTAC GGCAACCAGA CCGTGCTCGA CGTGCTCGCC GACGGCGACC ACTTCGGCAA CGGCGTCCTG ACCGGCGAGA CCGAGCAGTG GGCCTTCACC GCCAGGGCGG TCACCCCGGT GATCGCGCTG GTGCTGCCGT GGGAGACCGT GCAGCAGCTG CGCGACGAGA ACAGCCCGCT GCGCGCGATC GTCCACTCGA CCACGCGCAC CAGGGGCCTG CCGCAGAACA AGCACGGCGA GGCGTCCATC GAGATCGCCT CGGGCCACGA GGGCGAGGCC CCGCTGCCGG GCACGTTCGT GGACTACGAG CTGGCGCCGC GCGAGTACGA GCTGAGCGTC GCGCAGACCG TGCTGCGGGT CCACAGCCGC GTCGCGGACC TCTACAACAA GCCGATGAAC CAGACCGAGC AGCAGTTGCG GCTCACCGTC GAGGCCCTGC GCGAGCGGCA GGAGTTCGAG ATGGTGAACA ACCGCGACTT CGGCCTGCTG CACAACGCGG ACCTCAAGCA GCGCATCCAC ACCCGCACCG GCCCGCCCAC CCCGGACGAC CTGGACGAGC TGCTCAGCCG CAGGCGCAAG ACCGCGTTCC TGCTGGCCCA CCCGCGCGCG ATCGCCGCCT TCGGGCGCGA GGCGACCAAG CGCGGCGTGT ACCCCGGCGT GGAGAACCAC AACGGCACCA TGGTGACCAC CTGGCGCGGC GTGCCGCTGC TGCCGTGCGA CAAGATCCCG GTCACCGCCC AGGGCACCAG CTCGATCCTG GCGATGCGCG TGGGCGAGCA GGACAGCGGC GTGGTCGGCC TGCACCAGAC CGGCATCCCG GACGAGTTCC AGCCCGGCCT GAACGCGCGG TTCATGGGCA TCAACGAGCT GGGCGTCATC TCCTACCTGG TGAGCGCCTA CTACTCGGTC GCCGTGCTGG TCCCCGACGC GCTCGGGATC CTCGAGCACG TCGAGGTCGG CCGCGAGTAG
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Protein sequence | MTAIDPALPL DEIERTRQSL GTAAARNLAT TTKSAPQMQA ISARWLLREL PWVQTQAGTY RVNRRLTYAV GDGRITFTST GSDIRVIPQE LREVPALRAF EDDDVLTALA NRFVQREFTP GDLLVQRGDR AEELFLVAHG KVDKIGEGEY GNQTVLDVLA DGDHFGNGVL TGETEQWAFT ARAVTPVIAL VLPWETVQQL RDENSPLRAI VHSTTRTRGL PQNKHGEASI EIASGHEGEA PLPGTFVDYE LAPREYELSV AQTVLRVHSR VADLYNKPMN QTEQQLRLTV EALRERQEFE MVNNRDFGLL HNADLKQRIH TRTGPPTPDD LDELLSRRRK TAFLLAHPRA IAAFGREATK RGVYPGVENH NGTMVTTWRG VPLLPCDKIP VTAQGTSSIL AMRVGEQDSG VVGLHQTGIP DEFQPGLNAR FMGINELGVI SYLVSAYYSV AVLVPDALGI LEHVEVGRE
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