| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4970 |
|---|
| Symbol | |
|---|
| ID | 8329168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5929742 |
|---|
| End bp | 5930332 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644945410 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003102642 |
|---|
| Protein GI | 256378982 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.460343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATCAGG AGTTCTGGGA CGCCATGTAC ACCAACGTCG ACTTCAGCTG GAGCGGGAAC
CCCAACGGGG CCCTCGTCGA CGAGATCACC GGCCTGCCCG CCGGGCGCGC GCTGGACGTC
GGCTGCGGCG ACGGTTCCGA CGCGCGCTGG CTCGCGGCGC AGGGGTGGCG GGTCACCGCC
GTCGACATCT CGCAGGTCGC CCTCGACCGC GCCGCCGCCG TGCAGACCCC GCACGAGATC
ACCTGGAGGC TGCTCGACCT GGCGAAGGAG GCCCCCGCCG AGACCTACGA CCTGGTCTCC
GCGCACTACC TCCCGATCCT CAAGTCCGCC CCCGACACCG CCAAGCACCT CGTCGAGGCC
GTCGCGCCGG GCGGGCGCCT GCTGCTCGTC GCCCACGACA CCCCGGCCGA GGGCGCGTTC
CACGGCCACG ACGGCACCGA GTTCCCGTAC GCCGACTTCG CCTCACCCGC CGACGTGCGC
GCCCTGCTCG GCGACGGCTG GACCATCGAG ACCGACGTCA AGCGCGACCG CGCCCTGAAG
GCCAACAACC ACCACGTGGA CATCATCCTG CGGGCCAGGC GGGACGCCTG A
|
|---|
| Protein sequence | MDQEFWDAMY TNVDFSWSGN PNGALVDEIT GLPAGRALDV GCGDGSDARW LAAQGWRVTA
VDISQVALDR AAAVQTPHEI TWRLLDLAKE APAETYDLVS AHYLPILKSA PDTAKHLVEA
VAPGGRLLLV AHDTPAEGAF HGHDGTEFPY ADFASPADVR ALLGDGWTIE TDVKRDRALK
ANNHHVDIIL RARRDA
|
|---|
| |