Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4865 |
Symbol | |
ID | 8329063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5794273 |
End bp | 5795706 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644945305 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003102537 |
Protein GI | 256378877 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAGG GCAGGTCCCA GGTCCTGAAG GCGCTCAGCG GCCTGCTGGT GGCCCTGTTC ACGGCCACGC TCAGCAGCAC CGTCGTGTCC ACCGCGCTGC CCAGGATGAT CAGCGACCTC GGCGGCTCGC AGGCGCAGTA CACCTGGGTG GTCACCGCGA CCCTGCTGAC CGCCACCGCC ACCACCCCGA TCTGGGGCAA GCTGGCCGAC CTGTTCAGCA AGAAGACGCT GGTGCAGGTG GCGATCGGCG TGTTCGTGGC CGGTTCGCTG GCCAGCGGCT TCAGCCAGGA CGCCGGTCAG CTCATCGCCG CCCGCGCGCT CCAGGGCGCC GGGGTCGGCG GGTTGCAGAC GCTGGTGCAG ATCGCGATCG CCGCGATGAT CCCGCCGCGC GAGCGCGGGA GGTACAGCGG CTACCTCAGC AGCGTCACGG CGGTGTCCAC GATCGGCGGC CCGCTGCTGG GCGGTCTGGT CGTGGACACG TCGTGGCTGG GCTGGCGCTG GTGCTTCTTC ATCGGCGTCC CGGTCGCGAT CGCCGCGCTG GTGCTGCTGC AGGTCACGCT GAACCTGCCG GTGGTGCGGC GGGAGCGGGT GCGCGTCGAC TACGCGGGCG CGGCGCTGAT CACGGCGGGC GTGTGCCTGC TGCTGGTGTG GGTCTCGTTC GTGGGCGACG CGTTCCCGTG GTCGTCCTGG CCGAGCCTGA GCATGGCCGG TGGTGCGGTG CTGCTGCTCG GCGCGGCGGT GTGGGTGGAG TCCCGCGTGC CGGAACCCGT TGTGCCGCTG GGGATCGTGC GTCAGCGGCC GACGGCGCTG GCGATCCTGG GCAGCCTGGC GGCGGGCACC GCGATGTACG GCGCGGCGGT GTTCCTGAGC CAGTACTTCC AGGTGAGCCG TGGCCACACG CCCACCGAGG CGGGGTTGCT GACCATCCCC ATGATGGCGG GAATCCTGGT GGCGTCGACG GTCGTGGGCA GGCTGGTGAC CCGCACCGGC AAGCTCAAGC CGTACCTGGT GGCGGGCTCG CTCTCGCTCA CGGCGGGCTT CGCGGTCCTC GGCTTCCTGG ACCGCGAGAC CCCGCTGGTG GTGCTGTCGG TGGCGATGGC GCTGGTGGGC GCGGGGGTCG GCATGACGAT GCAGAACTTC GTCCTGGTGG TCCAGAACGC CGTGCCGCTG AAGGACATCG GCGCAGCCAG CTCCACGGTC TCGTTCTTCC GCTCGCTCGG CGGGACGATC GGCGTGGCCG TCCTGGGCGC CGTCCTGGCC CGCGACGTCG CGGCGAACCA GGGCGACGTG CCGACCGCGT ACGGCGAGGC GACGGCGCAG GTGTTCCTGA TCTCGGCGGC GGTCGCGGCG GTGGGCGTGC TGGCGGCGGT GCTGCTCAAG CCGGTGGTGC TGCGGACGAG CCTGGACGTG GTGAAGGAGC CCGAGAGGGC CTGA
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Protein sequence | MTEGRSQVLK ALSGLLVALF TATLSSTVVS TALPRMISDL GGSQAQYTWV VTATLLTATA TTPIWGKLAD LFSKKTLVQV AIGVFVAGSL ASGFSQDAGQ LIAARALQGA GVGGLQTLVQ IAIAAMIPPR ERGRYSGYLS SVTAVSTIGG PLLGGLVVDT SWLGWRWCFF IGVPVAIAAL VLLQVTLNLP VVRRERVRVD YAGAALITAG VCLLLVWVSF VGDAFPWSSW PSLSMAGGAV LLLGAAVWVE SRVPEPVVPL GIVRQRPTAL AILGSLAAGT AMYGAAVFLS QYFQVSRGHT PTEAGLLTIP MMAGILVAST VVGRLVTRTG KLKPYLVAGS LSLTAGFAVL GFLDRETPLV VLSVAMALVG AGVGMTMQNF VLVVQNAVPL KDIGAASSTV SFFRSLGGTI GVAVLGAVLA RDVAANQGDV PTAYGEATAQ VFLISAAVAA VGVLAAVLLK PVVLRTSLDV VKEPERA
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