Gene Amir_4726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4726 
Symbol 
ID8328924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5636832 
End bp5638001 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content77% 
IMG OID644945170 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003102402 
Protein GI256378742 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGGCG CGGGCATCGT CGGCTCGGCG ATCGCCCGCG CACTGGCCCG CGAGGGCTGC 
GCGGTGACCG TCGTCGACCG CGGGCCCAGC GCGGGCGGGA CGTCCGCAGG CGGCGAGGGG
AACCTGCTGG TCTCCGACAA GGAGCCCGGT CCCGAGCTGC GCCTCGCCCA GCGCTCCCTC
TCCTCCTGGC TGCGCATCGA GGACGAGCTG CGCGACGAGC TGCCCGCCGC CTTCCCCGAC
CTCGAACTCG AGCGCAAGGG CGGCCTCGTC GTCGCCACCA CCGACGCGGG CGCCGCGGCG
CTGCGCGAGT TCGCCGCCGC CCAGCGCGCC GCGGGCGTCA CCGCCGAGGC CGTCGACGAC
GACCGGGTCC GCGAGCTCGA ACCCGACCTC ACCCCGGACC GCGCCGCCGT CGTCCACTAC
CCCGACGACA TGCAGGTCCA GCCCGTCGCG GCCACCGAGG CGCTGCTCGC CGCCGCCCGC
CGCCACGGCG CCCAGGTCCG CCAGGGCGTC GAGGTCACCG GACCGGTGCT GGACGGCCCG
AGGCTCGTCG GCGTCACCAC GACCACCGGG CAGACCCTCA CCGCCGACGC CGTCGTGCTC
GCCGCCGGAC CCTGGTCCGG CGCGGTCGCC GAGCGCCTCG GCGCGCACCT GCCCGTCGCG
CCCCGCCGGG GCACCGTCCT GGTCACCTCC CGGATGCCGC AGCGCGTGTG GCACAAGGTC
TACGACGCCG ACTACGTGGG CGCGGTCGGC TCCGGCGCCG CCGACCTCCA GGTGTCCAGC
GTGGTCGAGT CGACCGCCGC GGGCACCGTC CTCATCGGCT CCTCCCGCGA GCGCCGCGGC
TTCGACGAGC GCATCGAGGC CCGCGTGCTC TCCGCGCTCG CCGCCAAGGC GCTGCTGCTG
TTCCCGTTCC TGGCCGACGT CCAGGTCATG CGCGCCTACG GCGGCTTCCG CCCGTTCGTG
CCCGACCACC TGCCCGTCAT CGGCCCCGAC CACCGCCTGC CCGGCCTGTG GCACGCCACC
GGCCACGAGG GCGCGGGCAT CGGGCTCAGC CTGGCCACCG CCGAGATCCT GCGCGACGAC
CTGCTGCACG GGAAGCGCGA CGAGCTGGCC GCCGAGTTCC GCCTGGACCG ACCGACCCTG
CTGCCGCACC TGGAGGGGAC CGCCCGATGA
 
Protein sequence
MVGAGIVGSA IARALAREGC AVTVVDRGPS AGGTSAGGEG NLLVSDKEPG PELRLAQRSL 
SSWLRIEDEL RDELPAAFPD LELERKGGLV VATTDAGAAA LREFAAAQRA AGVTAEAVDD
DRVRELEPDL TPDRAAVVHY PDDMQVQPVA ATEALLAAAR RHGAQVRQGV EVTGPVLDGP
RLVGVTTTTG QTLTADAVVL AAGPWSGAVA ERLGAHLPVA PRRGTVLVTS RMPQRVWHKV
YDADYVGAVG SGAADLQVSS VVESTAAGTV LIGSSRERRG FDERIEARVL SALAAKALLL
FPFLADVQVM RAYGGFRPFV PDHLPVIGPD HRLPGLWHAT GHEGAGIGLS LATAEILRDD
LLHGKRDELA AEFRLDRPTL LPHLEGTAR