Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4361 |
Symbol | |
ID | 8328558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5153954 |
End bp | 5155189 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 644944825 |
Product | protein of unknown function DUF1205 |
Protein accession | YP_003102058 |
Protein GI | 256378398 |
COG category | [C] Energy production and conversion [G] Carbohydrate transport and metabolism |
COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000257109 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGAGTCC TCTTCACCGC GCTCCCGGCG GCCTCCCGCT TCCCGCACCT CGTCCCGCTC GCCTGGGCGC TGCGCGCGGC GGGCCACGAG CTCCGCGTCG CCACCCGCCC CGGCGGGACC GGCGCGGTCA CCGGGGCCGG GCTCACCCCG GTGGTCGTGG GCCCGCCCGC CCCGGCGAGA CCCGCCCCGG CGAGGCCCGC CGCGACCCCC GCCCCGGACG ACGACCTGCC CGGCCTCGCG CTGCTGGACG GCCCGGTGGA CGCCCTCGCC GCCCGCCTGC CGCCGGTGGA CGACGCCGTG GACGACCTGG TCGCGTTCGG TCGCCGCTGG CGCCCGGACC TGGTGGTGTG GGACGCCTCC GACTACTCCG GCCCGGTCCT CGCGCAGGTC CTCGGCGCGC CCAGCGCCCG CGTGCTGCTC GGGCTCGACC TGGTCGGCTG GCGCCGCGCC ACCCCCGACC GCCCCGACCC GCTCGCCGCC CTGCTCGGCG GCGCGCTCGC AAGGCACGGC GCGGCGCTCA CCGACGAGGT CGCGCTCGGC TCGGTCACGC TCGACCAGCT CCCGCCGTGG ATGCGCCTGC CCGTCGACCA CGACCACCTG CCCGTCCGGC ACGTCCCGCA CAACGCCCCC GCGATCGTCC ACGGCTGGCT GCGCGCCGGG CCGACGGGCC CGAGGATCTG CGTCCTCCCC GGCCCGGTCG CCGATTCCGC CGAGCGGGAC CGCGCCCGCG TCCTGCTGCG CGGGGCGGCC AGGCTCGGCG TCGAGGTCGT CACCGCCCTG CCCGCCGGTG AGGCCGCCCG GATCGGCCAC CTCCCCGACC ACGTCCGCCT GCACGACCCC CTGCCGCTGC ACGAGCTCCT CCCCACCTGC GCCGCCCTGG TCCACCGGGG CGACGCCGCC GCCGAGGGCG CCGCGATCGC GAGCGCCGTG CCGCAGCTGG TCGTCCCCGC CCCGCTGTGG GACGAGCCGC GCCGCGCCGA CCTGCTGGCC GCGCGCGGCG CCGCGCTGGT CGTGCGCCGC GACCGCCTCA CCGAGGGCGC CGTCGCGGAC GCGCTGACCC GCCTGCTCGG CGAGCCCGCG TTCGCCGAGG CGGCGGCGGT GGTCCACCGG GAGACCCTGG CCGTGCCCAG CCCGCACGAC CTGGTGCCCG CCCTGGAAGC CCTGGTCACC GAGCGGTCGG CGCGGTCCGT CCCGGCGGCG CGGCCCGCCC GCCCGGCGCG CGCGCCGGTC CGCTGA
|
Protein sequence | MRVLFTALPA ASRFPHLVPL AWALRAAGHE LRVATRPGGT GAVTGAGLTP VVVGPPAPAR PAPARPAATP APDDDLPGLA LLDGPVDALA ARLPPVDDAV DDLVAFGRRW RPDLVVWDAS DYSGPVLAQV LGAPSARVLL GLDLVGWRRA TPDRPDPLAA LLGGALARHG AALTDEVALG SVTLDQLPPW MRLPVDHDHL PVRHVPHNAP AIVHGWLRAG PTGPRICVLP GPVADSAERD RARVLLRGAA RLGVEVVTAL PAGEAARIGH LPDHVRLHDP LPLHELLPTC AALVHRGDAA AEGAAIASAV PQLVVPAPLW DEPRRADLLA ARGAALVVRR DRLTEGAVAD ALTRLLGEPA FAEAAAVVHR ETLAVPSPHD LVPALEALVT ERSARSVPAA RPARPARAPV R
|
| |