| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4256 |
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| Symbol | |
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| ID | 8328453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5014057 |
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| End bp | 5015076 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944724 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_003101957 |
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| Protein GI | 256378297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.231762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTCGTG TTCTGCACCT GACCGGTTCG CCGGTGAGCC CGTTCTTCGC CGAACTGTCC
ACTGTGTACG GTCGGGGCTG CCTGGGCGCG GCGGCGGACC CGGCGCGCTA CGAGTTCCTG
GTGGCGCACG TGACCCCGGA CGGCCGCTGG CGCTTCCCGG CGGACCTGAC GCCGGAGGCG
CTGGCGGCTG CACCCAGGCT GGGGCTGCCC GAGGCGCTGG GCCTGATCGA ATCCCGGTCG
GTGGACGTGG CCGTGCCGCA GCTGTTCTGC CCGCCCGGCA TGACCACGTA CCGCGCGCTG
CTGGACGCCC TGGGCGTGCC GTACCCCGGA AACCCGCCGG ACGTGATGGC GCTGGGCGCG
GACAAGGCGA TGACCCGCGC GGTCGTGGCG GCGGCGGGCG TCCCCGTCCC GGAGGGCCGC
GTGGTCACCT CGGCCGACCC CTGCCCGCTC CCGCCGCCGT TCGTGGTGAA GCCCGTGGAC
GCCGACAACT CCGACGGCCT GACCCTGGTG CACGACCGCG CCGACTACCA CGCGGCCCTG
GACGCGGCGT TCGCCTGCTC GCCCCGCCGC AGGGCCTTGG TGGAGCGCTA CGTGCCACCG
GGCCGCGAGG TCCGCTGCGG CGTGCTCGTC AGATCCGGCG TCCCGACGCC GCTCCCCTTG
GAGGAGTACC CGCTCCCGTC CGGCGTCCGC CCCCGCGCGG ACAAGCTGGC CGACGACGGG
GGCGGCTCCC TGTCCCTGGT GGCCAAGGCG GACGGCCGCT CGTGGATCGT CGACCACGAC
GACCCGGTGA CGGCGGCCGT GCAGGAGCAG GCGCTGCGCT GCCACGAGGC GCTGGGCTGC
CGCGACTACA GCCTGTTCGA CTTCCGGATC GACCCGGAGG GGCGGCCGTG GTTCCTGGAG
GCGGGGTTGT ACTGCTCGTT CGCGCCGACG AGCGTGATCA CGACGATGGC GGGCGCGGCG
GGGATCGGGT TGGCGGAGCT GTTCGCCGAG GCCGTCACCA CCGCCGCGCG CAGGGGGTGA
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| Protein sequence | MLRVLHLTGS PVSPFFAELS TVYGRGCLGA AADPARYEFL VAHVTPDGRW RFPADLTPEA
LAAAPRLGLP EALGLIESRS VDVAVPQLFC PPGMTTYRAL LDALGVPYPG NPPDVMALGA
DKAMTRAVVA AAGVPVPEGR VVTSADPCPL PPPFVVKPVD ADNSDGLTLV HDRADYHAAL
DAAFACSPRR RALVERYVPP GREVRCGVLV RSGVPTPLPL EEYPLPSGVR PRADKLADDG
GGSLSLVAKA DGRSWIVDHD DPVTAAVQEQ ALRCHEALGC RDYSLFDFRI DPEGRPWFLE
AGLYCSFAPT SVITTMAGAA GIGLAELFAE AVTTAARRG
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