| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4100 |
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| Symbol | |
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| ID | 8328293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4817745 |
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| End bp | 4819292 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944565 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003101802 |
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| Protein GI | 256378142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0908626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCCC ACTACAACGA CATCATCGTC GGAGCGGGAT CGGCCGGTTC GGTGCTCGCG
GCCAGGCTCA GCGAGGACCC GGCCAGGCGG GTGCTGCTGC TGGAGGGCGG ACCGGACCAC
GCCCGGCCGG ACGAGCTGCC CGAGGAGGTG TTCCACGGCA GGTCCATGTC CTTCACCGGG
CAGGACTGGG GCTTCCGCGC CGACGTGCAC GACGGCCGCC GCATCCGCTA CCCGCGCGGC
AAGCTCACCG GCGGCTCCTC CGCGGTCGGC GCGACGGTCG GGCTGCGCGG CGTGCCCGCC
GACTACGACG ACTGGGCGGC GGCGGGCAAC CCCGCCTGGT CCTACGAGGG GGTGCTGCCC
TACTTCCGCA GGCTGGAGAG CGACGGGGAC TACGGCGAGA GCGAGTTCCA CGGCGGCTCC
GGCCCGATCC CGATCCGGCG CTGGAGCGCG GACGAGCTGC CGATCGGGCA GACCGCGTTC
ACCCAGTCCT GCCTGGAGCA CGGGTTCGCC GAGGTCGCCG ACCACAACCA CCCGGAGGCC
ACCGGCGTCG GCTCCATCCC GTCCACCCGG CACGACCGGG ACCGCAGGGC CACCACCGCC
AGCACCTACC TGGCGCTGAC CAGGGGCAGG GCCAACCTGG AGCTGGCGCC CGGCCTGCTG
GTCGACCGGG TGGTGTTCGA CGGGCAGCGG GCGGTCGGCG TGCTGGTCGG CGCGCCCGGC
GCGGAACCGG AGCTGGTGCG CGGCGACCGG GTGCTGCTGG CGGCGGGCGC GATCGGCACG
CCCGCGATCC TGCTGCGCTC GGGCGTCGGA CCCGCCGAGG ACCTGCGGCG GCTGGGCGTG
GACGTGCGCG CCGACCTGCC GGGCGTGGGC GCGAACCTGG TCGACCACCA GCGCACCGGC
GCGTTCCTGG TGCCCGAACC GGGCTCGGTG GACCGCACCG AGGCGTTCCT GCAGCAGATC
CTGCGCACCA CCTCACCGGT CACCGGCGAC TTCAACGACC TCCAGTACTA CATGGTCAAC
CACTTCGGCC TCGGCCCGTT CCCGGAGCTG CAGATGCTCG CGGGCACCAC CGAGATCCTG
GGCGTGATGG TCGTGGCGCA GCGCCCCGGC TCGCGCGGCC GGGTCGCCGT CGACTCCACC
GACCCGCGCG CGGCCCCGGT GATCCGGTTG AACTTCCTGG ACGACGAGCG CGAGCTGGAC
GTGCTCGTGG ACGGGGTGCG CACCGCGTGG CGGCTGGCGC ACCACCCGGA CGTCCTCAAG
CTGGGGCAGG GCTTCGTGGT GCTGCGCGAC GCGATGATCG ACAACGACGA CATGGTGCGG
CAGTACGTCA AGACCAGCCT GGAGAGCGCT TACCACCCGA CCGGCACGGT CCGCATGGGA
CCGGCGTCCG ACCCGTCGAC CGCGGTGGAC GAGCGGGGCG CGGTGCACGG GCTGGAGGCG
CTGCACGTGT GCGACGCCTC GATCATGCCG AACACCGTGC GCGCCAACAC CAACCTCACC
TCCATCATGA TCGGCGAGCG GATGGCCGAC TGGCTGCGCG CCGGCTGA
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| Protein sequence | MTAHYNDIIV GAGSAGSVLA ARLSEDPARR VLLLEGGPDH ARPDELPEEV FHGRSMSFTG
QDWGFRADVH DGRRIRYPRG KLTGGSSAVG ATVGLRGVPA DYDDWAAAGN PAWSYEGVLP
YFRRLESDGD YGESEFHGGS GPIPIRRWSA DELPIGQTAF TQSCLEHGFA EVADHNHPEA
TGVGSIPSTR HDRDRRATTA STYLALTRGR ANLELAPGLL VDRVVFDGQR AVGVLVGAPG
AEPELVRGDR VLLAAGAIGT PAILLRSGVG PAEDLRRLGV DVRADLPGVG ANLVDHQRTG
AFLVPEPGSV DRTEAFLQQI LRTTSPVTGD FNDLQYYMVN HFGLGPFPEL QMLAGTTEIL
GVMVVAQRPG SRGRVAVDST DPRAAPVIRL NFLDDERELD VLVDGVRTAW RLAHHPDVLK
LGQGFVVLRD AMIDNDDMVR QYVKTSLESA YHPTGTVRMG PASDPSTAVD ERGAVHGLEA
LHVCDASIMP NTVRANTNLT SIMIGERMAD WLRAG
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