Gene Amir_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3953 
Symbol 
ID8328146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4633430 
End bp4633744 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content74% 
IMG OID644944429 
Productanti-sigma-factor antagonist 
Protein accessionYP_003101666 
Protein GI256378006 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.233499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCG AGCTGACCCT GGCCACCACC AGCCGCGCGG ACGGCGCGGT GGTGCTCACC 
GTGGCGGGAG AGATCGACAT GGCCAACGCC GCGCGGTTCA CCGGGGCGCT CGCGGAGGCG
GTGCGCGGGG CGCCGCTGGG GTGTGGACCG GTGGTGGTCG ACCTGCTGGG GGTGGGGTAC
CTGGACAGCG CGGCGCTGAG CGGGCTGTTC GCGCACGCGG AGCGGGTGGA GGTGGTGGCG
GGGGAGCTGC TGGAGGCGGT GCTGACGGTG TCGGGGTTGG CGGCGATCAC GTCGGTGCGG
ATCCTGGGGG AATGA
 
Protein sequence
MNPELTLATT SRADGAVVLT VAGEIDMANA ARFTGALAEA VRGAPLGCGP VVVDLLGVGY 
LDSAALSGLF AHAERVEVVA GELLEAVLTV SGLAAITSVR ILGE