Gene Amir_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3574 
Symbol 
ID8327764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4151424 
End bp4152044 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content78% 
IMG OID644944070 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003101310 
Protein GI256377650 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCAGA TCTGTGCAGT CGACAGCGCG CTGGTGCCGG TGGCCGTGGT GGCCAGGGAC 
CCGATGCTGG AGGCCGGGGC GGCGAGCGCG TTGCGCGCCT GCCCCGAGCT GGTGGTGGTG 
GAGGGCGAGG CCGCGGAGTC CGCGCGGGTC GCCGTGGTGC TGGTCGACGC GGTCGACCGG 
GAGGTGCTGG ACCTGGCCCG CGCGCGGCGC GGCGCCGTGG TGCTGGTGGT GGCCGAGGTG 
ACGGCCGTGC AGGCGCTGCA CGCCGTGCTC GCCGGGGTGC GCGGCCTGCT GCGCCGCCGG 
GACGCGGACG CGCGGCGGCT CACCCGCGCG GTCATGGCCG CCGCCGTCGG GGACTGCACG 
GTGCCCCCCG ACCTGCTCGA CCGGCTGCAG GGCGCGGTGG GGGAGCCCGT CTCGCCCGCG 
CTGGCGGGCG GCGGGCTGAG CGAGCGCGAG CGCGCGGTGC TCGCCCTGGT CGCCGAGGGG 
CGCGAGACCG GGGAGATCGC GAAGGAGCTG TGCTACTCGC CGCGCACCGT CACCACGGTG 
GTGCACGACA TCACCCGCCG GTTCCGGCTG CGCAACCGCG CGCACGCGGT GGCCTACGCG 
CTGCGGGCGG GCCTGCTGTG A
 
Protein sequence
MEQICAVDSA LVPVAVVARD PMLEAGAASA LRACPELVVV EGEAAESARV AVVLVDAVDR 
EVLDLARARR GAVVLVVAEV TAVQALHAVL AGVRGLLRRR DADARRLTRA VMAAAVGDCT 
VPPDLLDRLQ GAVGEPVSPA LAGGGLSERE RAVLALVAEG RETGEIAKEL CYSPRTVTTV 
VHDITRRFRL RNRAHAVAYA LRAGLL