| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3569 |
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| Symbol | |
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| ID | 8327759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4145071 |
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| End bp | 4146525 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944065 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003101305 |
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| Protein GI | 256377645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0058203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCC CGATCATCCC CGGTTTCCAC CCCGATCCGA GCGTGTGCCG GGTGGGCGGG
GACTACTACC TGGTCTGCTC CAGCTTCGAG TACTTCCCCG GAATCCCCGT CTTCCACAGC
CGGGACCTGC TGACCTGGGA GCAGATCGGC AACGCCCTCG ACCGCCCCGA GCAGCTGCGG
CTGGCGGGCG CGACCTCCTC CGGCGGGCTG TACGCGCCGA CGCTGCGGCA CCACGGCGGC
AAGTTCTGGC TGATCGTCAC GAACGTCTCC GGCGGCGGGA ACCTGCTCTT CCACGCCGAG
GACCCGGCGG GCCCGTGGTC CGACCCGCTG CCGCTGCCCG GCGTGCACGG CATCGACCCG
GACCTGGCGT GGGACGAGGA CGGGAACTGC TGGTGCACCT GCGCCGGGGT GAGCCAGGTG
CGGATCGACA CCACCACCGG GGAGGCGCTC GGCGGGCAGA CGCGGATCTG GTCGGGCAGC
CCCGGCGCGA AGGCCCCCGA GGCGCCGCAC CTCCACCGGG TGGGCGAGCA CTGGTACCTG
CTGATCGCCG AGGGCGGCAC CGAGCGCGGG CACGCGGTGT CGGTGGCGCG CGGCGATTCG
GTGAACGGTC CGTTCACCCC CTGCCCGGAC AACCCGGTCC TGACCCACCG GGGCACCGAC
GACCCGGTGC AGAACACCGG GCACGCCGAC CTGGTGCAGG CGGTGGACGG CACCTGGTGG
CTGGTGCTGC TGGGCGTGCG GCCGGGCGGC GGGTCGCCGG GCTGGCACGT GCTGGGCCGG
GAGACGTTCC TGGCCCCGGT GACCTGGGTC GACGGCTGGC CGGTGGTCGG CGAGCCGGTG
ACCGCTCCCC CGCGCCCGGC CGAGCCGGTG CGGGAGGACT TCGACTCGCC GGAGCTGCAC
CCGCGCTGGA TCTCGGTGCG GGAGCGCTCC CCCGAGCGGT GCGCCACCAC CGCCCGGCCG
GGCTCGCTCA CGCTGCGCGC CGCCGAGGGC GACCCGGAGG GCGCGTTCGT CGGCCGACGC
CAGCAGCACC CGTCGTTCGT GGCGCGCGCC GCCGTCGACG CGGGCGGCGG CGAGGGCGGG
CTGGTGCTGC GCCTGGACGA GCGGCACCAG TACTCGGTGG AGCTCTCCGG CGGACGGGCG
GTGGCGTGGG CGCACGTCGG GCCGCTGCGC GTGGAGGTCG GCAGCGCCGA GGTCGGGCCG
GGCGAGGTGG TGCTGGAGAT CGAGGTCGCC GAGACCCGCG TGATCACCGA CCCGCGCACC
GGTCCCGACG AGGTGGCGCT GCGGGTGGTC GCGGCAGGCG GCGCGCGCGC CGAGCTGGCG
GTGCTGGACG GGCGCTACCT GTCCACCGAG GTCGCGGGCG GCTTCACCGG CCGGGTGGTC
GGCGTGCGGG CCACGAGCGG GCAGGTGCAC GTCGACTGGT TCGACTACGA GCCCGTCGAC
CCCGCCACGG CCTGA
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| Protein sequence | MGTPIIPGFH PDPSVCRVGG DYYLVCSSFE YFPGIPVFHS RDLLTWEQIG NALDRPEQLR
LAGATSSGGL YAPTLRHHGG KFWLIVTNVS GGGNLLFHAE DPAGPWSDPL PLPGVHGIDP
DLAWDEDGNC WCTCAGVSQV RIDTTTGEAL GGQTRIWSGS PGAKAPEAPH LHRVGEHWYL
LIAEGGTERG HAVSVARGDS VNGPFTPCPD NPVLTHRGTD DPVQNTGHAD LVQAVDGTWW
LVLLGVRPGG GSPGWHVLGR ETFLAPVTWV DGWPVVGEPV TAPPRPAEPV REDFDSPELH
PRWISVRERS PERCATTARP GSLTLRAAEG DPEGAFVGRR QQHPSFVARA AVDAGGGEGG
LVLRLDERHQ YSVELSGGRA VAWAHVGPLR VEVGSAEVGP GEVVLEIEVA ETRVITDPRT
GPDEVALRVV AAGGARAELA VLDGRYLSTE VAGGFTGRVV GVRATSGQVH VDWFDYEPVD
PATA
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