Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3565 |
Symbol | |
ID | 8327755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4141041 |
End bp | 4141610 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944061 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003101301 |
Protein GI | 256377641 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0847285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCCCC GCCCCGGAGC CGACTCCACC CGCGAGCGCG TCCTGGACGC GGCCACCGCC GAGTTCGCCG CGCACGGCAT CGCCGGGGCC CGCGTCGACC GCATCGCCAA GGCCGCGAGG ACCAGCAAGG AACGCGTCTA CGCCTACTTC AGCAGCAAGG AGGAGCTCTA CCGGCGCGTC AGCGCCCACG AGCTCGCCGC GATCGCCAAG GCCACCCGCC TGGACCCCAC CGACCTGCCC GGCTACGCGG GCCGCGTGCA CGACCACTTC GCCGCGCACC CCGAGCGCCA CCGCCTGCTC ATGTGGGGCC GCCTGGAGCT GGCCCCCGCG GGCAACCCGG CCGAGGACCC GTTCAAGCGC GCCCTCGCCC ACAAGGTCGA GCAGCTGCGC GCCGCCCAGG AGGCGGGCCA CCTCGACCCG TCCTGGGACC CGCTCGACGT CCTGACCTTC CTCAACCAGA TCGCCATGTC CTGGGCCGGT CAGCAGGAGC TCGAGGACGA GGACTTCGCC GCCGCCCGCC GCGCCGCGAT CGTCACCGCC GTGCAGCGCC TCTTCCCGGC CACCGCCTGA
|
Protein sequence | MTPRPGADST RERVLDAATA EFAAHGIAGA RVDRIAKAAR TSKERVYAYF SSKEELYRRV SAHELAAIAK ATRLDPTDLP GYAGRVHDHF AAHPERHRLL MWGRLELAPA GNPAEDPFKR ALAHKVEQLR AAQEAGHLDP SWDPLDVLTF LNQIAMSWAG QQELEDEDFA AARRAAIVTA VQRLFPATA
|
| |