| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3317 |
|---|
| Symbol | |
|---|
| ID | 8327507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3892588 |
|---|
| End bp | 3893877 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943829 |
|---|
| Product | beta-lactamase class A-like protein |
|---|
| Protein accession | YP_003101069 |
|---|
| Protein GI | 256377409 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2367] Beta-lactamase class A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.313271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTC GTTTCCTCGC CGTGGGCACC GCGATCGCGC TGCTGCTCGC GCTCACCACG
GCGCCGGCCA CGGCCGCGCC GGGGTCCACG CAGGACAGTC CGGACACCCA GTTCGCTTGG
CTGGTCGACG CTTCCGCGCG CGTCCCGCTG CCCGCCGACG AGGTGGCCGC GCACCTGGAC
TCCCCGCTGC TGTCCGCGGT CGGGGGCGTG GACGGGTTCA ACCAGACCCT GGCGTCGCTC
GGGACGCTCA CCGCAGGCGC CGTGGTCGAC CGGACGCCCA CCGAGCTGCG GCAGGTCGTC
GGCAGCGCGG TCGGGGAGCT GCTCGGCACG CTCACGGTCA ACCCCGCCGG GCTGATCGCG
GGGCTGCGCT TCTCGCCCCA CCTGCCCGCC CCCACCTCGT GGGAGCAGGT CGACGCCGCG
CTGGGCTCGC TGGCGCCCCG CGTCTCGTTC GCCGCCGCCA CGATCACGCC CGAGGGGTGC
GCGCCCGTCC ACGGCCTGAA CGAGCGCACC GCGCGACCGC TCGGCTCCGC CTTCAAGCTC
TACGTCCTCG GCGCGCTCGC CCGCGAGGTC AAGGCCGGGC GGCTGTCCTG GGACACCGGG
CTGCCGCTGC GCGAGTCCTG GAAGTCGTTC CCCTCGGGCG TCCTGCAGGA CCAGCCGGAC
GGCACGGTGC TCACCCTCGC CGAGCACGCC GAGCACATGA TCTCCATCAG CGACAACACC
GCCACCGACC ACCTGATCCA CCTGCTCGGT CGCGGCGAGG TGCAGCGGCA GTTCGCCCGG
TTCGGCAACA CCACCCCGAA CTCGCCGATG CCCACCACCC GCGAGCTGCT CACGCTCAAG
GGCTTCCAGT ACCCGGCGGC GGCGACCGTG TACACCGCGC TGCCCCAGCG GCTGCGCGAG
GCCGCGCTGA ACGCGGTGGG CCGGGTGCCC AGGACCGCCG TGCAGCCGTG GACCGAACCG
CGCGCGATCG ACCAGCTGGA GTGGTTCGGC TCGCCGGTGG ACATGTGCGC CGCGATGGCC
GGGCTCTGGC AGGGGCACGA CCCGCAGCTC GCCAAGGCCA TGTCGATCAA CGACGGCGGG
ATCGCGCTGC CGTCGGCGCG GTTCCCGACC GTCTGGTTCA AGGGCGGGTC CGAACCGGGG
GTGCTGACGC TCAGCTACCT GGTGCGGCGG GACGACGGGA CGCTGCTCAC GGCCAGCGCG
ATGCTGTCCG ACCCGGAGAA CGCGCTCGAC GAGGCGACCG CGGCGCCGCA GGTGCTCGCG
GTGCTGCGAG GAGCGCTTCA GCTCGCCTGA
|
|---|
| Protein sequence | MIRRFLAVGT AIALLLALTT APATAAPGST QDSPDTQFAW LVDASARVPL PADEVAAHLD
SPLLSAVGGV DGFNQTLASL GTLTAGAVVD RTPTELRQVV GSAVGELLGT LTVNPAGLIA
GLRFSPHLPA PTSWEQVDAA LGSLAPRVSF AAATITPEGC APVHGLNERT ARPLGSAFKL
YVLGALAREV KAGRLSWDTG LPLRESWKSF PSGVLQDQPD GTVLTLAEHA EHMISISDNT
ATDHLIHLLG RGEVQRQFAR FGNTTPNSPM PTTRELLTLK GFQYPAAATV YTALPQRLRE
AALNAVGRVP RTAVQPWTEP RAIDQLEWFG SPVDMCAAMA GLWQGHDPQL AKAMSINDGG
IALPSARFPT VWFKGGSEPG VLTLSYLVRR DDGTLLTASA MLSDPENALD EATAAPQVLA
VLRGALQLA
|
|---|
| |