Gene Amir_3222 details

Gene Information

• Locus tag: Amir_3222
• ID: 8327412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3754123
• End bp: 3756144
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644943736
• Product: cellulose-binding family II
• Protein accession: YP_003100976
• Protein GI: 256377316

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCGTGA CCTCCCGTGG CAGCGCCGCC ACGGCCACCG CCCGCACCAC CACCGCGCTC 
GTGCTGCTCA CCGCACTCGC ACTCCCGCAC CCCGCCACCG CCGCGCCACT CACCGGGGCC 
GGCGCCCCCG CACCCCCCGC CGCCGCACCC CCGCCCGCGC CCGCCACCTC CTCGACCGCG 
GCCGAGGACC TGGTCGGCGA CGTGGTGTTC TCCACGCCCA GCGGCACTTT CCAGAGTCAG 
GTGTCGGTGT CGCTGTCGAC CCCGGTCGCG GGCGCCCAGC TGCGCTACAC CACCGACGGC 
GCCCTCCCCA CCGCGCAGTC CCCGCTGTAC CAGGGAACCC CGCTGCGCTT CACCCGCACC 
ACCCAGCTGC GCGCGCGGCC CTTCACCGGC GCGACCGCCT CCGGCGCCAC GGGAACGGCC 
ATGTACGTCG CCCGCGACAC CGCCACCGCC CACGACCTGC CGGTGGTCCT GGTCGACACC 
TACGGCGCGG GCAAACCCGG CCGGGAGTAC CTCGACTCCA CCACCATGGT CTTCCAGCCG 
GGCGCAGGCG GCACGACCTC GCTCGCGTCC GCCCCCGCCG TCGCCACCCG CGCCGGGGCC 
AAGCTGCGCG GCCAGTCCTC GGCCTCGTTC GACAAGACCC CGTACCGCCT GGAGTTCCAC 
GACAACGCGG GCGACGACGC CGACCACCCG GTGCTCGGGA TGCCCGCCGA CTCGGACTGG 
GTGCTGCGCG GCCCGTTCCC GGACAAGTCG CTGGTCCGCG AGGCCCTGGT CTACGACCTC 
GGCCGGGAGC TGGGGCTGAA GGCCCCGCGC CACGCGTTCG CCGAGCTGTA CGTCAACACC 
GACGCCGGAC CGGTCGGGGC GAACGACTAC CAGGGCGTCT ACATGATCGT GGAGACGATC 
AAGAACACCA AGAACCGGCT GGACCTCAAG AAGCTCAAGG AGGAAGACAC CACCACGCCC 
CGGATCCAGG GCGGGTACAT CTGGAAGTTC GAGTGGATGG CCGCCGAGGA GCCCACGCTG 
CCCTGCACCG GGAACGCGTG CTGGAGCTAC CTGGAGCTGG TCGACCCGTC CTCGCCGAAC 
CCCGCCCAGA AGGACTGGTT GCGCGCGCAC CTGAAGGCGT TCAACGACGT CCTGCGCGCG 
CCGAACTCCG CCGACCCCGC CACCGGGTAC CGGGCGTACC TCGACGTGCC CTCGTTCGTC 
GACCACCTGA TCGTCAACGA GGTCAGCCGC AACATGGACG CCTACGTCCG CAGCTCCTAC 
TTCCACAAGG ACCGCGACGG CAAGATCGTC GCCGGGCCGC TGTGGGACTT CGACCTCAGC 
TTCGGCGTGG GCGGCTACTT CCAGAACGAC CAGGTCGCGG GCTGGCAGCA CCAGCAGACC 
CGCCAGCCGA TGCCGAACGA CTGGTTCCCG CAGCTGCTGC GCGACCCGGC GTTCGTGGCG 
CAGGTCAAGG CCCGCTGGCA GGAGCTGCGC CGGGGCCCGC TCGCGGACTC CGCGCTGCAG 
GGCCGGATCG ACGCCCTGAC GCGCCCGCTC GCGAACGGCG CGGCGCGCAA CTTCCAGCGG 
TGGCCCAACC TGACCGCGCC CACCGTCGGC TTCTTCGTCA CGCCGACCGC GCCCACCTGG 
CAGGGGCAGG TGCAGCACGT GCGGGACTGG CTGCTGCGCC GGGTCGCCTG GCTGGACTCC 
TCCGCCGGGT GGGGCGGCGG CACGGACAAC CCGCCGGGCG GGGCCGGGTG CACGGCGACC 
TACTCGGTGA CCAACCAGTG GCAGGGCGGG TTCCAGGCCG AGGTCAGGGT GACCGCGGGG 
AGCGCGCCGA TCAGCTCGTG GGCGGTGACG TGGACGGCGG GCGCCGGCGA GTCGGTCACC 
CAGTCCTGGA ACGCGACCGT GACCGCCCAG GGCGGCTCGG TGACCGCCAG GAACGCCGCG 
CACAACGGCG CGGTGGCGGC CGGGGGCAGC ACCACCTTCG GGTTCCTCGG GACCGCGCCC 
GGCACGCCGG GGAAACCGGT GCTCGGCTGC ACGAGCGGCT GA 

 

Protein sequence

MRVTSRGSAA TATARTTTAL VLLTALALPH PATAAPLTGA GAPAPPAAAP PPAPATSSTA 
AEDLVGDVVF STPSGTFQSQ VSVSLSTPVA GAQLRYTTDG ALPTAQSPLY QGTPLRFTRT 
TQLRARPFTG ATASGATGTA MYVARDTATA HDLPVVLVDT YGAGKPGREY LDSTTMVFQP 
GAGGTTSLAS APAVATRAGA KLRGQSSASF DKTPYRLEFH DNAGDDADHP VLGMPADSDW 
VLRGPFPDKS LVREALVYDL GRELGLKAPR HAFAELYVNT DAGPVGANDY QGVYMIVETI 
KNTKNRLDLK KLKEEDTTTP RIQGGYIWKF EWMAAEEPTL PCTGNACWSY LELVDPSSPN 
PAQKDWLRAH LKAFNDVLRA PNSADPATGY RAYLDVPSFV DHLIVNEVSR NMDAYVRSSY 
FHKDRDGKIV AGPLWDFDLS FGVGGYFQND QVAGWQHQQT RQPMPNDWFP QLLRDPAFVA 
QVKARWQELR RGPLADSALQ GRIDALTRPL ANGAARNFQR WPNLTAPTVG FFVTPTAPTW 
QGQVQHVRDW LLRRVAWLDS SAGWGGGTDN PPGGAGCTAT YSVTNQWQGG FQAEVRVTAG 
SAPISSWAVT WTAGAGESVT QSWNATVTAQ GGSVTARNAA HNGAVAAGGS TTFGFLGTAP 
GTPGKPVLGC TSG