Gene Amir_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3117 
Symbol 
ID8327307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3602172 
End bp3602786 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID644943637 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100877 
Protein GI256377217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG CCGCCACCGC TGCCGCCACC AGGGAGAAGG TCCTGGTGGC GGCCCGCGAG 
CTGTTCACCA CGTCGCAGTA CGAGGACGTC AAGGCGGCCG ACATCGCCCG CGCGGCGGGC 
GTCGCGCACG GCCTGGTGTT CCACCACTTC GGCAGCAAGC AGGGGCTCTA CGGCGAGGTC 
CTGTGCGCGA TCGGCCGCGA GGTGCTGGAC CTGCACGTCA ACGACCCGGC CGTGCCGCTG 
GGCAGGCGGA TTCGCCAGTC GCACGCGGCC CACCTGTCGT ACCTCGCGGC GCACCGCGAC 
CTGGCGCTGA ACCTGGTGCT GCAACCGTGG GGGGTGGTGG AGTCGTTCGA CCGCGTGCGG 
GACGACGGCA ACCGGAACCT CGCCGAGAAC CTGGGGCTGG ACTTCGAGCT TCCCGCGGTG 
CGGACCGCGC TGCGGATGTA CACGAAAGCG GCCGACCAGC TCGCGCGCGA CTACTTGCTG 
GGCGAGCACC CGTTCGACCA GGGGACGGTG GTGGAGATGC TGATGACGGT GCTGGCGGGG 
GTGCTGCGGG CGGCGCGGGT CGCGGAGCCG TCGCTGAAGG TGGACCGGGC GCTCAGGGAG 
CTGGCGCGGT CGTAG
 
Protein sequence
MTRAATAAAT REKVLVAARE LFTTSQYEDV KAADIARAAG VAHGLVFHHF GSKQGLYGEV 
LCAIGREVLD LHVNDPAVPL GRRIRQSHAA HLSYLAAHRD LALNLVLQPW GVVESFDRVR 
DDGNRNLAEN LGLDFELPAV RTALRMYTKA ADQLARDYLL GEHPFDQGTV VEMLMTVLAG 
VLRAARVAEP SLKVDRALRE LARS